Sphingopyxis sp. PAMC25046: E5675_11310
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Entry
E5675_11310 CDS
T06315
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
sphx
Sphingopyxis sp. PAMC25046
Brite
KEGG Orthology (KO) [BR:
sphx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sphx03032
]
E5675_11310 (gyrA)
03400 DNA repair and recombination proteins [BR:
sphx03400
]
E5675_11310 (gyrA)
Enzymes [BR:
sphx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
E5675_11310 (gyrA)
DNA replication proteins [BR:
sphx03032
]
Prokaryotic type
DNA Topoisomerases
E5675_11310 (gyrA)
DNA repair and recombination proteins [BR:
sphx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
E5675_11310 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
QCB54967
UniProt:
A0A4P7RVE7
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All DBs
Position
2427460..2430180
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AA seq
906 aa
AA seq
DB search
MQPSDDGVSPINIVDEMKTSYLDYAMSVIVSRALPDVRDGLKPVHRRILYAAQEGGFVPG
RPYKKSAKIVGDVMGNYHPHGDSAIYDALARMTQDWSLRVPLIDGQGNFGSMDPDPPASM
RYTEARLAKTAMVLLNDLDKDTVDFQPNYDASRDEPTVLPARFPNLLVNGAGGIAVGMAT
NIPPHNLGEVIDATLAMIDRQLEGGPPVTLEELMAIVPGPDFPTGAMMLGQGGARSAYAT
GRGSIMMRATHIIEEGRNDRQSIVLTSIPFQVGKSGLVEKIAEAARDKRIEGVADIRDES
NREGVRVVIELKRDATAEVVLNQLWRHTPAQSSFPANMLAIRGGRPEMLGLQDILTAFIA
FREEVITRRCKFELAKARDRAHILLGLVVAVSNLDEVVRIIRGSPSPAAAREALLAREWP
IGEIAPYIRLVEAIEGEMEESATYRLSEVQVKAILDLRLHRLTALGRDEIGKELGELATE
IEELLSILADRVKLYGVMREELVAVRDEFATPRKTLVAPAADGIDDEDLIEREEMVVTVT
LDGYIKRTPLDTFRAQRRGGKGRAGMATKDEDVVTELFVTSTHTPVLFFSTAGKVYRMKV
WRLPEGGPATRGRPMVNLLPLAQGETISTVLPLPEDEAEWGKLHVMFATAKGSVRRNSMD
AFTNVPSNGKIAMKFEGDDEDDRLIGVALLDESDDVLLATRQGKAIRFAGDDVREFQSRN
STGVRGMRLADGDAVISLSILHRVGTSSEEREAYLRAAPWKDNENEPTLPGDRMAELAGR
EQFILTVCANGYGKISSAYEYRRTGRGGQGITNIDNIGRNGPVVASFPATKVHQLMLVTD
QAKLIRMGLDSMRVIGRGSAGVRLFDVAKDEHVVSAALIEESDEEDVEGEAGVVPESEAP
TEAAPE
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atgcagccgtccgacgacggcgtttcgccgatcaatatcgtcgacgaaatgaaaacatcc
tacctcgattacgcgatgagcgtgatcgtcagccgcgcgctccccgacgtgcgcgatggc
ctgaagccggtgcaccgccgcatcctctacgcggcgcaggaaggcggcttcgttccgggc
cgcccgtacaagaaatcggcgaagatcgtcggcgacgtgatgggtaactatcacccccac
ggcgacagcgcgatctacgacgcgctcgcgcgtatgacgcaggactggtcgctgcgcgtg
ccgctgatcgacggtcagggcaatttcggctcgatggaccccgatccgccggcatcgatg
cggtacaccgaagcgcgcctcgccaagaccgcgatggtgctgctcaacgatctcgacaag
gacacggtcgacttccagcccaattatgacgcgagccgcgacgaaccgacggtgctcccg
gcgcgcttcccgaacctgctcgtcaacggtgctggcggcatcgcggtcggcatggcgacc
aatatcccgccgcacaacctcggcgaagtgatcgacgcgacgctcgccatgatcgaccgc
cagctcgaaggcgggccgccggtcacgctcgaggaactgatggcgatcgtccccggtccc
gacttcccgaccggcgcgatgatgctcggccagggcggcgcgcggagcgcctatgcgacg
ggccgcggctcgatcatgatgcgcgcgacgcacatcatcgaggaaggcaggaacgaccgc
caatcgattgttctgacgtcgattccttttcaggtcggtaagtcgggcctcgtcgagaag
atcgccgaggcggcgcgcgacaagcggatcgagggcgtcgccgacatccgcgacgaatcg
aaccgcgagggcgtgcgcgtcgtcatcgaactgaagcgcgacgcgaccgccgaggtcgtg
ctcaaccagctctggcgccacacccccgcgcagtcgagcttccccgcgaacatgctcgcg
atccgcgggggccgccccgagatgcttgggctgcaggacatcctgaccgccttcatcgcc
ttccgcgaagaggtcataacgcgccgctgcaaattcgaactcgcgaaggcgcgcgaccgt
gcgcacatcttgctcggcctcgtcgtcgcggtgtcgaacctcgacgaggtcgtccgcatc
atccgcggttcgccctcacccgctgcagcccgcgaagccctgctcgcgcgcgaatggccg
atcggcgagatcgccccctacatccgcctcgtcgaagcgatcgagggcgagatggaggaa
agcgccacctatcgcctgtccgaagtgcaggtgaaggcgatcctcgatcttcgcctccac
cgcctcaccgcgctcggccgcgacgaaattggcaaggaactcggggagttggcgaccgaa
attgaggaactgctttcgatcctcgccgaccgcgtcaaactctatggcgtgatgcgcgaa
gaactcgttgcggtgcgcgacgaattcgcgacgccgcgcaagacgctcgtcgcacccgcc
gccgacggcatcgacgacgaggatctgatcgagcgcgaggagatggtcgtcaccgtcacc
ctcgacggctatatcaagcgcaccccgctcgacacgttccgggctcaaaggcgcggcggc
aagggccgcgcgggcatggcaaccaaggacgaggacgtcgtcaccgaactgttcgtcacc
tcgacgcacacgcccgtcctcttcttctcgaccgcgggcaaggtctatcgcatgaaggtt
tggcgcctgcccgagggcggacccgcgacgcgcggccgcccgatggtcaacctgctgccg
ctcgcgcagggcgaaaccatctcgaccgtcctcccgcttcccgaggacgaggccgaatgg
ggcaagctccacgtcatgttcgcaaccgcgaagggcagcgtgcgtcgtaacagcatggac
gctttcaccaacgtgccctcgaacggcaagatcgcgatgaagtttgagggcgacgacgaa
gacgaccgcctgatcggcgtcgcgctgctcgacgaaagcgacgatgtgctgctcgcgacg
cgccagggcaaggcgatccgcttcgctggcgacgacgtccgcgaattccagagccgcaat
tcgaccggcgtgcggggcatgcgccttgccgatggcgacgcggtgatctcgctttcgatc
ctccaccgcgtcggcaccagcagcgaggaacgcgaagcctatctccgcgccgcgccgtgg
aaggataacgagaacgaaccgacgctacccggcgaccgcatggccgaactcgcgggccgc
gaacagttcatcctcaccgtctgcgccaacggttatggcaagatctcgtcggcctatgaa
tatcgccgcaccggccgcggcggtcagggtatcaccaacatcgacaatatcggccgcaac
ggccccgtcgtcgcgagcttccccgccaccaaggtccatcagctcatgctcgtcaccgac
caggcgaagctcatccgaatggggctcgattcgatgcgcgtcatcggtcgcggcagcgcc
ggcgtgcgcctgttcgacgtcgccaaggacgaacatgtcgtctcggcggcgctgatcgag
gaaagcgacgaggaagacgtcgaaggcgaggcgggcgtagtgcccgaatccgaagccccg
accgaggcagcgcccgaatga
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