Sphingopyxis sp. PAMC25046: E5675_11745
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Entry
E5675_11745 CDS
T06315
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sphx
Sphingopyxis sp. PAMC25046
Pathway
sphx03420
Nucleotide excision repair
sphx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sphx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
E5675_11745
03430 Mismatch repair
E5675_11745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphx03400
]
E5675_11745
Enzymes [BR:
sphx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
E5675_11745
DNA repair and recombination proteins [BR:
sphx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
E5675_11745
MMR (mismatch excision repair)
Other MMR factors
E5675_11745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
AAA_12
AAA_11
Integrase_2
Motif
Other DBs
NCBI-ProteinID:
QCB56956
UniProt:
A0A4P7S1A4
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All DBs
Position
2506463..2508769
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AA seq
768 aa
AA seq
DB search
MSPNSTPDLTRPDPSDPPYLQGLNGPQRQAVLTTEGPVLMLAGAGTGKTAALTARLAHII
ATRRAWPSEILAVTFTNKAAREMRERIGRMIGDAVEGMPWLGTFHSICAKMLRRHAELVG
LQSNFTILDTDDQLRVLKQLIQAEGLDEKRWPARQLAGLIDKWKNRGLTPADLDAADKEA
YADGKGQHFYALYQARLKTLNACDFGDLLLHMLVILKTHRDVLEQYQARFKYILVDEYQD
TNASQYLWLRLLAQARKNICCVGDDDQSIYSWRGAEVANILRFEKDFPGATVIRLEQNYR
STPQILAAASALIAQNSDRLGKTLWTDLDAGDKVRVVGVWDGPEEARRIGEELETLQHRK
VSLDRTAILVRAQFQTREFEDRFIAIGMPYRIVGGFRFYERAEIRDALAYLRLVQSSADD
LAFERIVNVPKRGLGDKALQRIHQFARHERAPLFHAASRITETDELTPQARRQLANFVAQ
MRNWQAKANELSHPELTQLILDESGYTAMLQADRSVEAAGRLENLSELVRAMEEYETLEE
FLEHVSLVMDRDNDDQTETVTIMTIHAAKGLEFDHVFLAGWEDGVFPSQRSMDEGGTASL
EEERRLAYVAITRARQRASIYHAANRRIYGQWMSSIPSRFIGEIPPEHVDSENSFGGGQS
LWRANWSAQGDPFAHVAERQPARTMTRGPAWQRALASSSTVTRAPAPSEKGPAASVGAKP
RADLAIGIRVFHEKFGYGEIIDIDGNKLEVEFDQAGSKRVLDSFVKLA
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgtctcccaactcgacgcctgacctgacccgccccgacccgtcggacccgccctatctg
caaggactgaacggtccgcagcggcaggcggtgctgaccaccgaaggccccgtgctgatg
ctcgcgggcgcgggcaccggcaagaccgcggcgctcaccgcgcgcctcgcacatatcatc
gcgacgcggcgcgcctggccttccgaaatcctcgcggtcacctttaccaacaaggcggcg
cgcgagatgcgcgagcggatcgggcggatgatcggcgacgcggtcgaaggcatgccgtgg
ctaggcacctttcacagcatctgcgcgaagatgctccgccgccacgccgagctcgtcggg
ctgcagagcaatttcacgatcctcgacaccgacgaccagctccgcgtgctgaagcagctc
atccaggccgaggggctcgacgagaaacgctggcccgcgcgccagctcgcggggctgatt
gacaagtggaagaaccgcggactgacccccgccgacctcgatgccgccgacaaggaagcc
tatgccgacggcaagggccagcatttctacgcgctctatcaggcgcggctgaagacgctc
aacgcctgcgatttcggcgacctgctgctccatatgctcgtgatattgaagacgcatcgc
gacgtgctcgagcaatatcaggcgcgcttcaaatacatcctcgtcgacgaatatcaggac
accaacgccagccagtatctctggcttcggctactggcgcaggcacgcaagaatatctgc
tgcgtcggcgacgatgaccagtcgatctattcgtggcgcggcgccgaggtcgcgaacatc
ctgcgcttcgaaaaggacttccccggcgcgacggtgatccgcctcgaacagaattatcga
tcgactccgcagatacttgctgccgcgtcggcgctgatcgcgcagaacagcgatcggctc
ggcaagaccttgtggaccgatctcgacgcgggcgacaaggtccgagtggtcggcgtgtgg
gacgggcccgaagaggcgcggcggattggcgaggagctggagacgctccagcatcgcaag
gtcagtctcgatcgcaccgcgatcctcgtccgcgcgcagttccagacgcgcgagttcgag
gaccgtttcatcgcgatcggcatgccatatcgcatcgtcggcggtttccgcttctacgag
cgcgccgaaatccgcgatgcgctcgcctatcttcgccttgtccagtcgtcggccgacgat
ctggctttcgaacgcatcgtcaatgtccccaaacgcgggctcggtgacaaggcgctgcaa
cgcatccaccagttcgcgcgccacgaacgcgcgccgctgttccacgcggcgtcgcggatc
accgaaaccgacgagctaaccccgcaggcgcgccgccagcttgccaatttcgtcgcgcag
atgcgcaattggcaggcgaaggcaaacgagctgtcgcaccccgagctgacacagctgatc
ctcgacgaatcgggctataccgcgatgctgcaggccgaccgtagcgtcgaggccgcaggg
cggctcgaaaacctctccgaactcgtccgcgcgatggaagaatatgaaacgctcgaggaa
tttcttgagcatgtcagcctcgtcatggaccgcgacaatgacgaccagaccgagacggtg
acgatcatgacgatccacgccgccaaggggcttgaattcgatcatgtcttcctcgcgggc
tgggaggatggcgtcttcccctcgcagcggtcgatggacgaaggcggcaccgccagcctc
gaagaggaacgccggctagcctatgtcgcgatcacccgtgcaaggcagcgcgcgagtatc
tatcacgccgcgaaccggcgcatctatggtcagtggatgagcagcatccccagccgcttc
atcggcgaaatcccgcccgaacatgtcgacagcgaaaacagcttcggcggtggccagagc
ctgtggcgcgccaactggtcggcgcagggcgaccccttcgcgcatgtcgccgagcgccag
cccgcgcgcacgatgacgcgcggtccggcgtggcagcgcgcgctcgcatcgtcgtcgacc
gtcacgcgggcaccggcccccagcgagaaaggccccgcagcatcggtcggcgccaaaccg
cgcgccgacctcgcgatcgggatccgcgtttttcacgaaaagttcggttacggcgaaatc
atcgatatcgacggcaacaagctcgaagtcgaattcgaccaagcgggcagtaaacgggtg
ctcgacagcttcgtcaagctcgcctga
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