Sphingopyxis sp. PAMC25046: E5675_12760
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Entry
E5675_12760 CDS
T06315
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
sphx
Sphingopyxis sp. PAMC25046
Pathway
sphx03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sphx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
E5675_12760 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphx03400
]
E5675_12760 (uvrA)
DNA repair and recombination proteins [BR:
sphx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
E5675_12760 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
E5675_12760 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
nSTAND1
DnaJ_CXXCXGXG
AAA_16
AAA_25
AAA_21
TylF
Motif
Other DBs
NCBI-ProteinID:
QCB55219
UniProt:
A0A4P7RY07
LinkDB
All DBs
Position
2712681..2715575
Genome browser
AA seq
964 aa
AA seq
DB search
MSLTHISVRGAREHNLKGVDVDLPRDALIVITGLSGSGKSSLAFDTIYAEGQRRYVESLS
AYARQFLEMMQKPDVEHIDGLSPAISIEQKTTSRNPRSTVATVTEIYDYMRLLWARVGIP
YSPATGEPISAQTVSQMVDRVMELPEGTRAYLLAPVVRGRKGEYKKELAQWQKDGFTRVR
IDGEFYEIGDAPALDKKYKHDIEVVVDRVAVREGLETRLADSFETALKLAEGLAYVDLAD
GPVPGREEEDTGGAMKGAGIPANRLIFSEKFACPVSGFTIAEIEPRLFSFNAPQGACPAC
DGLGERLEFDPELVVPNHALSLKKGAVVPWAKSNPPSPYYMQVLESLGKAYDFGLDTPWQ
DLPGAVQQIILHGTGGMPVELTFKDGKRTYTTHKAFEGVIGNLNRRMLQTESAWMREELG
KYQTAQPCETCHGARLRPEPLAVKIAGEDISMSAQRSVADALDWFSTLDEKLNDTQRQIA
KAILKEINERLGFLNNVGLDYLNLNRTSGTLSGGESQRIRLASQIGSGLSGVLYVLDEPS
IGLHQRDNDRLLATLKRLRDLGNTVIVVEHDEDAIRHADYVVDMGPGAGVHGGEIVAEGT
LKQVLANKKSLTAAYLTGAKKIEVPAHRRPGNGFDLVLKGARANNLNNVTAKIPLGTFTC
VTGLSGSGKSSLIIDTLYASAARVLNGARMVAGPHDSLTGLEHCDKVIDIDQSPIGRTPR
SNPATYTGAFTVIRDWFAGLPEAQARGYKPGRFSFNVKGGRCETCTGDGLIKIEMHFLPD
VYVTCETCHGKRYNRETLEVKFKGMSIADVLDMTVEDAAEFFKAVPAIRDKMAMLVRVGL
GYIKVGQQATTLSGGEAQRVKLAKELSRRSTGQTLYILDEPTTGLHFEDVRKLLEVLQAL
VDQGNSVVVIEHNLDVIKTADYILDLGPEGGVKGGEIVAAGTPEQVVKEKRSFTGQYLAP
LLAG
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgagtctcacccatatttcggttcgcggcgcgcgcgagcataatctcaagggcgtcgac
gtcgacctgccgcgcgatgcgctgatcgtcatcaccggcctgtcgggttcgggcaaatcg
agcctcgcgttcgacaccatctacgccgaaggccagcggcgctatgtcgagagcctctcg
gcctatgcgcgccagttcctcgagatgatgcagaagcccgacgtcgagcatatcgacggc
ctgtcgcccgcgatcagcatcgagcagaagacgacttcgcgaaacccgcgctcaaccgtc
gcaacggtgaccgaaatctacgactatatgcgcctgctctgggcgcgcgtcggcatcccc
tattcgcccgcgacgggcgagccgatttcggcgcagacggtcagccagatggtcgaccgg
gtgatggagttgcccgagggtacgcgcgcctatctgctcgccccggttgtgcgcggccgc
aagggcgagtataagaaggaactcgcgcagtggcagaaggacggcttcacgcgcgtccgc
atcgacggcgagttttacgagatcggcgacgcgccggcgctcgacaagaaatacaagcat
gacatcgaggtcgtcgtcgaccgcgtcgcggtgcgcgagggcctcgaaacgcgcctcgcc
gacagtttcgagacagctctgaaactggccgagggactcgcctatgtcgacctcgccgac
ggtccggtgccggggcgcgaggaggaagacaccggcggcgcaatgaaaggcgcgggcatt
cccgcgaaccgcctcatcttctccgaaaaattcgcctgcccggtgtctggcttcacgatc
gccgagatcgaaccgcgattgttcagtttcaacgcgccgcagggcgcgtgtccagcatgc
gacgggctgggcgagcggctggaattcgaccccgagctcgtcgtccccaaccatgcgctg
agcctgaaaaaaggcgcggtcgtgccgtgggcgaaatcgaacccaccctcgccttactat
atgcaagtgctcgaaagcctgggcaaagcctatgacttcgggctcgacacgccgtggcag
gacctgcccggcgcggtgcagcagatcatcctccacggcaccggcggcatgcccgtcgag
ctgaccttcaaggacggcaagcgcacctatacgacgcacaaggcgttcgaaggcgtcatc
ggcaacctcaaccgccggatgttgcagaccgagagcgcgtggatgcgcgaggagcttgga
aagtaccagaccgcacagccgtgcgaaacgtgccacggcgcgcggctgcgccccgaaccg
ctcgcggtgaagatcgcgggcgaggacatcagcatgtcggcgcagcggtcggtggcggac
gccctcgattggttcagcacgctcgacgaaaagctgaacgacacgcagcggcagatcgcg
aaggcgatcctgaaagagatcaacgaacggctcggcttcctcaacaatgtcgggctcgac
tatctcaacctcaaccgcaccagcggcacgctcagcggcggcgagagccagcgcatccgc
ctcgcgagccagatcggcagcggcctgtcgggcgtgctctatgtgctcgacgagccgagc
atcggcctccatcagcgcgacaacgaccggctgctcgcgacgctcaagcgcctccgcgac
ctcggcaacacggtgatcgtcgtcgagcatgacgaggatgcgatccgccacgccgactat
gtcgtcgacatgggccccggcgcgggcgtccatggcggcgagatcgtcgccgagggcacg
ctgaaacaggtgctcgcgaacaagaagagcctgaccgcggcgtatctgaccggcgcgaag
aagatcgaggtgcccgcgcaccgccgccccggcaacggcttcgacctggtgctgaagggc
gcgcgcgcgaacaatctcaacaatgtcaccgcgaagatcccgctcggcaccttcacctgc
gtcaccggcctgtcgggcagcggcaagtcgagcctgatcatcgatacgctctatgccagc
gcggcgcgcgtgctcaacggcgcgcggatggtcgcggggccgcacgacagcctgaccggg
ctggagcattgcgacaaggtgatcgacatcgaccagtcgccgatcggccgcaccccgcgg
tcgaaccccgccacttatacgggcgccttcacggtgatccgcgactggttcgcggggctg
cccgaggcgcaggcgcgcgggtacaagccggggcgtttcagcttcaacgtcaagggcggg
cgctgcgagacgtgcaccggcgacgggctgatcaagatcgagatgcacttcctgcccgac
gtctatgtgacgtgcgagacgtgccacggcaaacgatataaccgcgaaacgctggaggtg
aagttcaaggggatgagcatcgccgatgtgctcgacatgacggtcgaggatgcggccgag
tttttcaaggcggtgcccgcgatccgcgacaagatggcgatgctcgtccgcgtcgggctc
ggctatatcaaggtcgggcagcaggcgacgaccttgtcggggggcgaggcgcagcgggtg
aagctcgccaaggaactgtcgcggcgctcgaccgggcagacgctctatatcctcgacgag
ccgaccaccggcctgcatttcgaggatgtccgcaagctgctcgaagtgctgcaggcgctg
gtcgatcagggcaacagcgtcgtggtgatcgagcataacctcgacgtcatcaagactgcc
gactatatcctcgacctcggtcccgaaggcggggtcaagggcggcgagatcgtcgcggcg
ggaacccccgaacaggtggtgaaggaaaagcgcagcttcaccggacaatatctggcgccg
ctgctggcagggtaa
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