KEGG   Sphingopyxis sp. PAMC25046: E5675_12995
Entry
E5675_12995       CDS       T06315                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
sphx  Sphingopyxis sp. PAMC25046
Brite
KEGG Orthology (KO) [BR:sphx00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sphx03032]
    E5675_12995
   03036 Chromosome and associated proteins [BR:sphx03036]
    E5675_12995
   03400 DNA repair and recombination proteins [BR:sphx03400]
    E5675_12995
DNA replication proteins [BR:sphx03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    E5675_12995
Chromosome and associated proteins [BR:sphx03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    E5675_12995
DNA repair and recombination proteins [BR:sphx03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      E5675_12995
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_2 DUF2267 Peptidase_M35 HU-CCDC81_euk_1
Other DBs
NCBI-ProteinID: QCB55255
UniProt: A0A4P7RXS0
LinkDB
Position
complement(2759222..2759494)
AA seq 90 aa
MNKQDLIAAVADSSGLTKGDASKAVEAVFDAITGSLKKGGEVRLVGFGTFAVSKRKASTG
RNPRTGETMTIAASNQPKFKAGKALKDAVN
NT seq 273 nt   +upstreamnt  +downstreamnt
atgaacaaacaagacctgatcgccgccgtcgccgattcgagcggcctgaccaagggtgat
gccagcaaggccgtggaagctgtcttcgacgcgatcaccggctcgctgaagaagggcggc
gaagtccgtctcgtcggcttcggcaccttcgcggtcagcaagcgcaaggcatcgaccggt
cgcaacccgcgcaccggcgaaacgatgaccatcgcggcgtcgaaccagccgaagttcaag
gccggcaaggccctcaaggacgccgtcaactaa

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