Sphingopyxis sp. PAMC25046: E5675_13040
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Entry
E5675_13040 CDS
T06315
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
sphx
Sphingopyxis sp. PAMC25046
Pathway
sphx00260
Glycine, serine and threonine metabolism
sphx00460
Cyanoamino acid metabolism
sphx00630
Glyoxylate and dicarboxylate metabolism
sphx00670
One carbon pool by folate
sphx00680
Methane metabolism
sphx01100
Metabolic pathways
sphx01110
Biosynthesis of secondary metabolites
sphx01120
Microbial metabolism in diverse environments
sphx01200
Carbon metabolism
sphx01230
Biosynthesis of amino acids
sphx01240
Biosynthesis of cofactors
sphx04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
sphx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
E5675_13040
09102 Energy metabolism
00680 Methane metabolism
E5675_13040
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
E5675_13040
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
E5675_13040
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
E5675_13040
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
E5675_13040
Enzymes [BR:
sphx01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
E5675_13040
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Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Aminotran_1_2
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
QCB55263
UniProt:
A0A4V1CKA1
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Position
2767494..2768801
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AA seq
435 aa
AA seq
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MTTDTLDKPIKSAGYFTDGVGTVDPAVAAAMKHELEREQYQIELIASENIVSKAVLEAQG
SVFTNKYAEGYPGKRYYQGCAPSDEVETLAIDRAKQLFDAGFVNVQPHSGAQANGAVMLA
LTKPGATIMGMSLDAGGHLTHGAPPAMSGKWYNAVQYGVRPDDHLVDFDQVEALAKEHRP
SLIIAGGSAYPRTLDFARFRAIADDVGALLMVDMAHFAGLVAGGAHPSPMEHAHVVTTTT
HKTLRGPRGGMILTNDEAIAKRINSAVFPGLQGGPLMHVIAAKAVAFGEALRPEFKDYAK
ATIANAQALANRLKARGADVVAGGTDTHLALIDLRPLGITGRDADEALERSAITCNKNGV
PFDPLPPVKTSGIRVGSPAGTTRGFGIAEFEEIGDMVADVLEALRDKGEHGDADVEADVR
GRVRALCERFPIYQG
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgaccacagacacgctcgacaagcccatcaaatcggccggctatttcaccgacggcgtc
ggcacggtcgaccccgcggtcgcggcggcgatgaagcacgaactcgaacgcgaacaatat
cagatcgagctgatcgcgtcggagaatatcgtttcgaaggcggtgctagaggcgcaagga
tcggttttcaccaacaaatatgccgaaggctatccgggcaagcgttattatcagggctgc
gcgccgtcggacgaggtcgaaaccctcgcgatcgatcgcgccaaacagctgttcgacgcc
ggtttcgtcaacgtccagccacactcgggcgcgcaggcgaatggcgcggtgatgctcgcg
ctgaccaagcccggcgcgacgatcatgggcatgagcctcgacgccggcggccacctgacg
cacggcgcgccacccgccatgtcgggcaaatggtataacgccgtgcaatatggcgtgcgc
cccgacgaccatctcgtggatttcgatcaggtcgaagcgctcgccaaggaacatcgcccc
tcgctgatcatcgccggcggctcggcctatccgcgcacgctcgatttcgcacgcttccgc
gcaatcgccgacgatgtcggcgcgctgctgatggtcgacatggcccactttgccggcctt
gtcgccggcggcgcgcatccgtcgccgatggagcatgcgcatgtcgtcaccaccacgacg
cacaagacgctgcgcggcccgcgcggcggcatgatcctgaccaacgacgaagcgatcgcc
aagcgcatcaattcggcggtcttccccgggctgcagggcggcccgctgatgcacgtcatc
gccgccaaggcggtcgccttcggcgaagcgctgcgtcccgaattcaaggattacgccaag
gcgaccatcgccaatgcgcaagcgctcgctaatcggctcaaggcgcgcggcgccgatgtc
gtcgcgggcggcaccgacacgcatctggcgctgatcgacctccgcccgctcggcatcacc
ggccgcgacgccgacgaggcgctcgagcgcagcgcgatcacctgcaacaagaatggcgtt
cccttcgacccgctgcccccggtcaagaccagcggtatccgtgtcggatcgcccgcgggc
acgacgcgcggcttcggcatcgccgagtttgaggaaatcggcgacatggtcgccgacgtg
ctcgaggcgctgcgcgacaagggcgagcatggcgacgccgatgtcgaagcggatgttcgc
ggccgcgtccgcgcgctatgcgagcgcttccccatctatcagggatag
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