Sphingopyxis sp. PAMC25046: E5675_13655
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Entry
E5675_13655 CDS
T06315
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
sphx
Sphingopyxis sp. PAMC25046
Brite
KEGG Orthology (KO) [BR:
sphx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sphx03009
]
E5675_13655 (rimO)
Enzymes [BR:
sphx01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
E5675_13655 (rimO)
Ribosome biogenesis [BR:
sphx03009
]
Prokaryotic type
ribosomal protein modification factors
E5675_13655 (rimO)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
Motif
Other DBs
NCBI-ProteinID:
QCB55371
UniProt:
A0A4P7S151
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All DBs
Position
2880200..2881570
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AA seq
456 aa
AA seq
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MTVKTLPTQPKVGMVSLGCPKALVDSERILTKLRADGYGLSPDYAGADVVLVNTCGFLDS
AKEESLEAIGEAMAENGRVIVTGCMGNEAEVIRARFPKVLAVTGAHQYEQVVDAVHDAAP
PTQGPFIDLVPEGGLKLTPRHYSYLKISEGCNHSCSFCIIPDLRGKLVSRRIDAVLREAE
KLVAAGTKELLVISQDTSAYGVDIRHDPRQWRGREVRAHMTDLARELGQLKTSEGRAPWV
RLHYVYPYPHVDAVIPLMAEGLLTPYLDIPFQHASPSVLKRMKRPANEAKVLERLKAWRD
IAPDISIRSSFVVGFPGETEEDFQYLLDWLDEAQLDRVGAFRFEPVAGAQANALDDPVPE
EVKEERYRRIMAKTAAISAAKLEAKIGRTLPVIIDEVGEADDDGSIGATGRSQADAPEID
GHVYLRDVAATLKAGDLVDVEIEDADEHDLFGVVTN
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgacagtcaaaacgctccccacccagccgaaggtcggcatggtttcgctcggctgcccc
aaggcgctcgtcgacagcgaacggattctgaccaagctccgcgccgacggctatggcctc
tcgcccgattatgcgggcgccgacgtcgtgctcgtcaacacctgcggcttcctcgactcg
gcaaaggaagagagcctcgaggcgatcggcgaagcgatggccgagaatggccgcgtcatc
gtcaccggctgcatgggcaacgaggccgaggtcatccgcgcgcgtttccccaaggtgctc
gcggttaccggcgcgcatcaatatgagcaggtcgtcgacgccgtccacgacgccgcgccg
ccgacgcagggccccttcatcgacctcgtccctgagggcgggctgaaactgacgccccgc
cactacagctatctcaagatttccgaaggctgcaaccacagctgctcgttctgcatcatt
cccgacctgcgcggaaagctcgtcagccgccgcatcgacgcggttctgcgcgaggccgaa
aagctcgtcgccgcggggacgaaggaactgctggtgataagccaggacacctcggcatat
ggcgtcgacatccgccacgacccgcgccaatggcgcggccgcgaagtgcgcgcgcacatg
accgacctcgcgcgcgaactcggccaattgaagaccagcgaaggccgcgccccgtgggtg
cgcctccattatgtctatccctatccgcacgtcgacgcggtgatcccgctgatggccgaa
gggctgctgacgccttacctcgacatccccttccagcatgcgagcccgagcgtcctcaag
cgcatgaagcgccccgcgaacgaagcgaaggtgctcgaacggctgaaggcgtggcgggac
attgcgcccgacatctcgatccgctcgagcttcgtcgtcggcttcccgggcgaaaccgag
gaggatttccaatatctcctcgactggctcgacgaagcccagctcgaccgcgtcggcgcc
tttcgcttcgaacccgtcgccggcgcgcaggcgaatgcgctcgacgatccggtgcccgaa
gaggtcaaggaagaacgctaccggcgcatcatggcgaaaaccgcggcaatcagcgccgcg
aagctcgaagccaagattggccgcacgctgcccgtgatcatcgacgaagtcggcgaagcg
gatgacgacggcagcatcggcgccaccggcaggtcacaggccgacgcgcccgagatcgac
ggccacgtctacctccgcgacgtcgcggcgacgctgaaagcaggcgatctcgtcgacgtc
gagatcgaggacgccgacgagcatgatctgttcggggtcgtgacgaactga
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