Sphingopyxis sp. PAMC25046: E5675_13895
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Entry
E5675_13895 CDS
T06315
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sphx
Sphingopyxis sp. PAMC25046
Pathway
sphx00061
Fatty acid biosynthesis
sphx00071
Fatty acid degradation
sphx01100
Metabolic pathways
sphx01212
Fatty acid metabolism
sphx02024
Quorum sensing
sphx04146
Peroxisome
Module
sphx_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sphx00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
E5675_13895
00071 Fatty acid degradation
E5675_13895
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
E5675_13895
09145 Cellular community - prokaryotes
02024 Quorum sensing
E5675_13895
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sphx01004
]
E5675_13895
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sphx04147
]
E5675_13895
Enzymes [BR:
sphx01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
E5675_13895
Lipid biosynthesis proteins [BR:
sphx01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
E5675_13895
Exosome [BR:
sphx04147
]
Exosomal proteins
Exosomal proteins of breast milk
E5675_13895
Exosomal proteins of breast cancer cells
E5675_13895
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Cap17-like_N
SH3_1
MazE_antitoxin
Motif
Other DBs
NCBI-ProteinID:
QCB55412
LinkDB
All DBs
Position
complement(2924836..2926665)
Genome browser
AA seq
609 aa
AA seq
DB search
MRLENPHLDHFPSLVAMFFDRAGRGGEDPFLWRKADRAWQPLSWRQVANQVAALAHNLRE
LGLKEGDRVVLVSENRPEWCIADLGIMAAGCIAVPTYTTNTERDHQHILDNSGAKAVIVS
TAKLARTLMPAVMRSEAHIVITMESLRVGQQGEVSVHDWAPLVEGGEAYVEETKARGLGV
KREDTACLIYTSGTGGAPRGVMQHHGAILHNAAGAAEVLVNDFGIGEEEVFLSFLPLSHA
YEHSGGQFLPIMVGAQIYYSEGLEKLVSNIEETRPTIMVVVPRLFEVIRARMIKAVEKQG
KLANWMLNQALRVGEKDYERRMGVFDRPVDLILDKLFRPKIGKRFGGRMKALVSGGAPLN
PEIGVFFHSIGLTLLQGYGQTEAGPVISCNRPSAGIKMDTVGPPLMNTEVRIADDGEICV
RGELVMKGYWRNDAETERVLIADPADPGAGPWLHTGDIGHIDDKGRIVITDRKKDLIVND
KGDNVSPQRVEGMLTLQPEILQAMVYGDKRPHLVGILVPDPEWATEWAETEGLPKDLKLL
REHEKFRTAIRTAVDRVNGQLSVIEKVRKFDFADEAFTIENEQMTPSMKIRRHVLKQVYE
DKIAALYKA
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgaggctggaaaatccccatctcgaccattttccgagtctggtcgcgatgttcttcgac
cgcgcggggcgcggcggcgaagatcccttcctgtggcgcaaggccgatcgcgcgtggcag
ccgctgagctggcggcaggtcgccaatcaggtcgctgcgctcgcgcacaatctgcgcgaa
ctcggcctcaaggaaggcgatcgggtggtgctggtcagcgagaaccggcccgaatggtgc
atcgccgaccttggcatcatggctgcgggctgtatcgccgtgccgacctatacgaccaac
accgaacgcgatcatcagcacatcctcgacaatagcggcgcgaaggcggtgatcgtgtcg
accgcgaaacttgcgcgcacattgatgcctgcagtgatgcggtccgaggcgcatatcgtc
atcacgatggaaagtctgcgcgtcggccagcagggcgaggtgtcggtgcacgactgggcg
ccgctcgtcgaaggcggcgaggcttacgtcgaggaaaccaaggcgcgcgggctcggcgtc
aagcgcgaggacaccgcctgcctcatctacaccagcggtaccggcggcgcgccgcgcggc
gtgatgcagcatcatggcgcgatcctgcacaatgcggcgggcgccgccgaagtgctcgtc
aacgatttcggcatcggcgaggaagaggtgttcctgtcgttcctgcccctcagccacgcc
tatgaacattcgggcggccaattcctgccgatcatggtcggcgcgcaaatctattatagc
gaagggctcgaaaaactcgtctcgaacatcgaggagacgcgcccgacgatcatggtcgtc
gtgccgcgcctgttcgaggtgatccgcgcgcggatgatcaaggcggtcgaaaaacagggc
aagcttgcgaactggatgctgaatcaggcgctgcgcgtcggcgagaaggattatgagcgg
cggatgggcgtgttcgaccggccggtcgacctgatcctcgacaaattattccggcccaag
atcggcaagcgcttcggcggccggatgaaggcgttggtgtcgggcggcgcgccattgaat
cccgaaatcggggtcttctttcattcgatcgggctgaccttgcttcagggctatgggcag
accgaggcggggccggtgatcagctgcaaccgcccgagcgcggggatcaagatggacacg
gtcggcccgccgttgatgaataccgaagtgcgcatcgccgacgatggcgaaatctgcgtg
cggggcgagctcgtcatgaagggctattggcgcaacgatgccgagaccgagcgcgtgctg
atcgccgaccctgccgaccccggagccgggccgtggctccacaccggcgatatcgggcat
atcgacgacaagggccggatcgtcatcactgaccgcaagaaggatctgatcgtcaacgac
aagggcgacaatgtctcgccgcagcgggtggagggaatgctgacgctccagcctgaaatc
ttgcaggcgatggtctatggcgacaagcgcccgcacctcgtcggtatcctcgtccccgat
cccgaatgggcgaccgaatgggccgagactgaaggactgcccaaggatctgaagctgctg
cgcgagcatgagaagttccgcaccgccatccgtaccgcggtcgatcgcgtcaacggccag
ctttcggtgatcgaaaaggtgcgcaagttcgactttgccgacgaagccttcacgatcgaa
aacgaacagatgacgccgtcgatgaagatccggcggcatgtgctgaaacaggtttatgaa
gacaagatagcagcgctgtataaggcttag
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