Sphingopyxis sp. PAMC25046: E5675_14265
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Entry
E5675_14265 CDS
T06315
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sphx
Sphingopyxis sp. PAMC25046
Brite
KEGG Orthology (KO) [BR:
sphx00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sphx02000
]
E5675_14265
Transporters [BR:
sphx02000
]
Other transporters
Pores ion channels [TC:
1
]
E5675_14265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
QCB57009
LinkDB
All DBs
Position
complement(3015435..3018368)
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AA seq
977 aa
AA seq
DB search
MLSAGAMAALCGAGQAHAQAAPEAPPADDAAAEAPGDAIVVTGYRQSIEQSLEQKREANS
LIEVITAEDIGKFPDKNVADALQRVPGVIITRDGGEGSRVSIRGLQSDLTLTLLNGNFIA
GADSGDPSRSFNYVLLPSNFIASTEVYKSAEARLEEGGVGGTVILNTRRPFDLPAWSGFV
SAEGTYSDTTKKFDPQIAGQISWKDPEERLGFLVGATYQERSNRELRGSTETWRWWSDRD
DDGNILTPATDVNGNPFENDDAISYWPGEGVTAQDGTHYSGHWAPQSVNAEVFSQHRKRL
GIQATAQMRPFDNLTVTANYFRFDYSSNFQSNVLKIPEWGYGNFFTGPTFDESGTIFQSA
NFQVPAAGTGCLVNTPPCTMETPQIAGTYSREKQVSNTFETEVAWNTDNFDAVAKFGKTR
ATGGPSMRFGVAAKPRLTVTGEEQNGNFLSFWDFTGGNLNMEFSPELQENIKNGIAQIDV
GSTGSGFTNSAISQRYAQLDLVRRFDSFLSAFRVGGKWREMSIHRETGRNEWYADPATKR
RYQDTPEGAVARPEYFYDNPIGNIAGGFDANLFPGINFENYLDYINDTYGPSVRVPEPNN
TYDLKEKVFAGYVQADFESGPLRGNIGLRVAHTKQSGVTSDRLQYLNDYCVDGPGGPFDP
DVPLGPDGNCQVRPLDEREEIVNTRIDQSKSYTDWLPSLNVVYEVVPDVVVRGAVAKVIS
RPSFNDLGSQRSLTYRSAAYAFDRGQFGEFEGWSGSGGNADLQPFSAWQYDLGVEWYFDR
GSVLGVGLFRKDVSDFVVPLVLDVTREVNGEQVLIQPYSTVANGSNARSQGVEVYAQHTL
DFGLGAQVNFTYNDTSVADITLDGETVGKSALVGSAKTQVNASVFYETDKFLVRASYNRR
GEVVGGLASGLNVYTDPYEQVDINASYELMDGLMLTASVINLTKSEERQHLGNDTKARFV
RSNYFGRRAYVGVSYKF
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atgctgagcgcgggcgcgatggccgcattatgtggtgcggggcaggcgcatgcacaggca
gcccccgaagcgccgcccgcggacgacgcggcagcggaggcacccggcgacgcgatcgtc
gtcaccggctatcgccagtctatcgaacagagccttgagcagaagcgcgaagccaattcg
ctgatcgaagtcatcaccgccgaggatatcggcaaattccccgacaagaatgtcgccgat
gcgctgcagcgcgtccccggcgtgatcatcacccgcgacggcggcgagggcagccgcgtc
agcatccgcggcctccagtcggatctgacgctcacgctgctcaacggcaatttcatcgcg
ggcgccgacagcggcgatccgtcgcgctcgttcaactatgtcctgctgccgtcgaacttc
atcgccagcaccgaagtctataaatcggccgaagcgcggctcgaggaaggcggcgtcggc
ggtacggtgattctcaacacccgccgtccgttcgacctcccggcctggtcgggcttcgtc
tcggccgaaggcacctattcggacaccaccaagaaattcgatccacaaatcgccggccag
atttcgtggaaggaccccgaagaacggctcggcttcctcgtcggcgcgacctatcaggaa
cgctcgaaccgcgaactgcgcggctcgaccgaaacctggcgctggtggagcgatcgcgat
gacgacggcaacatcctgaccccggcgaccgacgtcaacggcaatccgttcgaaaatgac
gacgcgatctcctattggccaggcgagggcgtgaccgcgcaggacggcacgcattattcg
ggtcattgggcgccgcagtcggtcaacgccgaagtcttctcgcagcatcgcaagcgcctc
ggtatccaggcgaccgcgcagatgcggccgttcgacaatctgaccgtcaccgccaattat
ttccgcttcgactatagcagcaatttccagagcaatgtgctgaagatccccgaatggggt
tacggcaacttcttcaccggcccgactttcgacgagagcggcacgatcttccagtcggcc
aatttccaggtgcctgcggcgggaactggctgccttgtcaatacgccgccctgcacgatg
gaaacgccgcagatcgcggggacttacagccgcgaaaagcaggtttcgaacacgttcgag
accgaggtcgcgtggaacaccgataatttcgacgctgtggcgaagttcggcaagacgcgc
gcgaccggcggcccgtcgatgcgcttcggcgtcgccgccaagccgcgcctgacggtgacg
ggcgaggagcagaacggcaactttctgagcttttgggatttcaccggcggcaatctcaac
atggaattctcgcccgagctgcaggagaatatcaagaacggcatcgcccagatcgacgtc
ggctcgaccggatcgggcttcaccaacagcgcgatttcgcagcgttacgcccagctcgat
ctcgtccgccgcttcgacagctttttgagcgccttccgcgtcggcggcaaatggcgcgag
atgagcattcaccgcgaaaccggccgcaacgaatggtatgccgacccggcgaccaagcgg
cgctatcaggacacgcccgagggcgcggtcgcgcggcccgaatatttctatgacaatccg
atcggcaacatcgccggcgggttcgatgcgaacctgttcccgggcatcaatttcgaaaat
tatctcgactatatcaacgacacctatggtccgtcggtgcgcgtgcccgagccgaacaac
acctatgacctcaaggaaaaggtgttcgccggctatgtgcaggccgattttgaaagcggc
ccgctgcgcggcaatatcggcctgcgcgttgcgcacaccaaacagtcgggcgtgacctcg
gatcgcctgcaatatctcaacgattattgcgtcgacggtcccggcggcccgttcgacccc
gatgtgccgctcggccccgacggcaattgccaggtgcggccgctcgacgagcgcgaggag
atcgtcaacacgcgcatcgatcagtcgaagagctacaccgactggctccccagcctgaac
gtcgtctatgaagtcgtgcccgacgtcgtcgtccgcggcgcggtcgcaaaggtgatctcg
cgtccctcgttcaacgatctggggtcgcagcgttcgctgacttatcgttcggccgcctac
gctttcgaccgcggccagttcggtgaattcgaaggctggtcgggcagcggcggtaacgcc
gacctccagcccttctcggcgtggcagtacgaccttggcgtcgaatggtatttcgaccgc
ggctcggtgctcggcgttggcctgttccgcaaggacgtgtccgacttcgtcgtcccgctc
gtgctcgacgtgacgcgcgaagtgaatggcgaacaggtgctgatccagccctattcgacc
gtcgccaacgggtcgaacgcccggtcgcagggcgtcgaagtctatgcccagcatacgctc
gacttcggcctcggcgcgcaggtgaacttcacctataacgacacgtcggtcgccgacatt
acgctcgatggcgagacggtcggcaagtcggcgctcgtcggcagcgcgaagacgcaggtc
aacgcttcggtcttctatgaaaccgacaagttcctcgtccgcgcctcgtataaccgccgc
ggcgaagtcgtcggcgggctcgcctcgggccttaacgtctacaccgacccctatgaacag
gtcgacatcaacgcgtcgtacgagctgatggacggcctgatgctcaccgcctcggtcatc
aacctgacaaagtcggaagagcgtcagcacctcggcaacgacaccaaggcgcgcttcgtc
cgcagcaactatttcggccgccgcgcttacgtcggcgtttcgtacaagttctga
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