Sphingopyxis sp. PAMC25046: E5675_16780
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Entry
E5675_16780 CDS
T06315
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sphx
Sphingopyxis sp. PAMC25046
Brite
KEGG Orthology (KO) [BR:
sphx00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sphx02000
]
E5675_16780
Transporters [BR:
sphx02000
]
Other transporters
Pores ion channels [TC:
1
]
E5675_16780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
QCB57058
LinkDB
All DBs
Position
3570735..3573728
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AA seq
997 aa
AA seq
DB search
MEHVRGPLGRFGAAMTALALVQAAPALAQEEASAADSTEAALSDQIIVTGSRVARDGFQA
PTPLVVLSQQDIQNTSPSNNIADFVNQLPQLAGSTRPANSRLNISNGSAGINALNMRNLG
ESRVLVLVDGRRSVGSTIFGWVDINTIPQALVDRVEVVTGGASSAYGSDAVTGVVNFVLN
KRLEGLRITGDIGLTDKGDGFNYSGSVAGGLSFADGRGHAVFNAEIAHQDGIYEIDPNDR
PWNHRGYLAFANPAYTATNGQPAFITFRENAGQTNQAPGGFITGSAGNNNALRGLYFGQN
GQVNQFNYGSFNSPALTSGSAVTRTVGGDWRLNDSGRRIGLSPKDDRWGAYGRLSYEIAD
GVEIFAEGSYNRQEVFFNAGPNLGSATLGTVGCTVVPVPTTCNAFALQTLGAARLAGVNS
ISITTTAADLPFRGINNKREVQRYVIGAEGEFDAFGKSARWDVYGQYSRSDLREQLRNIM
NVARMRDASNAAFAPSGNAGGYATGSIQCLINVDADANNNDPNCVPLNRLGIGVANPAAI
DYVLGDPYRKQVMEQYVAGANLSLTPFATWAGDVSIAIGGEYREEKIRGSVPEEFQPARN
ADGTTSNRWSVGNYLPFKGSYNVKEAYLETVVPLGLGLEFNGAVRATDYSTSGYVTTWKL
GATWAPIEDIRFRVTRSRDIRAPNLNELFQAGTANSDSVRNPAFVQGDPTSGPQFFPYSG
LTTGNPDLKPEKADSWNIGAVVTPRFLPGFSASVDYFRIDLEDAIDTISAQEIVNRCDEG
RQEYCDAITEDPAREQPGPPRVPYLLIRSQPFNFVSKLVRGIDFDAAYRLPVGGESSITL
RGNATRYIENLSDTGIAGVTPVNTVGANGSQSATPKWIFRGSLIYENPAFSGTITGRGVS
SGKYLANAIECTSGCPTSTSQAPTYDNNHVKGTFYVDLNLTQKVRMQSGSQAELFFNVTN
LFDADPLLLPETGLAANSTYSDLLGRQFRVGIRFRTK
NT seq
2994 nt
NT seq
+upstream
nt +downstream
nt
atggaacatgttcgtgggccgctgggccgtttcggggcggcgatgaccgcgctggcgctc
gtgcaggccgcaccagccctggcgcaggaggaagcctcagccgccgacagcaccgaagcg
gcgctgtccgaccagatcatcgtcaccggttcgcgcgtcgcacgcgacggcttccaggcc
ccgaccccgctcgtcgttctgtcgcaacaggacatccagaacacctcgccgtcgaacaat
atcgccgatttcgtcaaccagcttccgcaactcgccggttcgacgcggcccgccaactcg
cgcctcaatatttccaatggctcggcgggcatcaacgcgctcaacatgcgcaacctcggc
gaaagccgcgtactcgttctcgtcgacggccgccgttcggtcggttccacgattttcggc
tgggttgacatcaacaccatcccgcaggcgttggtcgatcgggtcgaggtggtcaccggg
ggcgcatcgtcggcctatggttccgacgctgtcacaggcgttgtcaatttcgtcctcaac
aaaaggctggaaggtctccgcatcaccggtgacatcggtctcaccgacaagggcgacggg
ttcaactattcgggtagcgtggcgggcggcctgtcgttcgccgacgggcgcggccacgcc
gtcttcaacgccgagatcgcgcaccaggatggcatctacgagattgatccgaacgaccgg
ccgtggaaccaccgcggctatctggccttcgcaaaccccgcctataccgccaccaatggc
caaccggcgtttatcacctttcgcgagaatgccggccagaccaatcaggcgcccggcggc
ttcatcacgggctcggctggcaacaacaatgcactgcgcggcctctatttcggtcagaat
ggtcaggttaatcaattcaactatggctcattcaactcgcccgcgctgaccagcggctcc
gcagtgacgcgcaccgtcggcggcgactggcgcctcaacgattcgggccgccgcatcggc
cttagccccaaggacgatcgctggggcgcctatggccgcctgagctacgaaatcgccgat
ggcgtcgaaatcttcgccgaaggctcgtacaaccggcaggaagtcttctttaatgcgggg
cccaacctcggatcagccacgctcggcaccgtcggttgcacggtcgtccccgtccccacg
acctgcaacgccttcgcgcttcaaacgttgggtgccgcgcgcctcgcgggcgtcaacagc
atcagcatcacgaccaccgcggccgacctcccgttccgcggcatcaacaacaagcgcgag
gtccagcgttatgtcatcggcgccgagggcgagttcgacgcgttcggcaaatcggcgcgc
tgggacgtctatggccagtatagccggtcggacctgcgggagcagcttcgtaacatcatg
aacgtggcccggatgcgagacgcgtcaaatgccgccttcgcgccgtcgggaaatgccggc
ggctatgcgaccggttcgatccagtgcctgatcaacgtcgatgcggacgccaacaacaac
gatccgaactgcgtgccgctcaaccgtctgggtatcggcgtcgccaacccggctgcgatc
gactatgtgctcggcgatccctatcgaaagcaggtgatggagcaatatgtcgccggtgcg
aacctgtcgctgacgccgttcgcgacatgggcgggcgacgtgagcatcgcgatcggcggc
gaatatcgcgaagagaagattcgcggcagcgtgccagaagagttccagcccgcccgcaac
gccgacggaacgacgtcgaaccggtggtcggtcggcaactatctgccgttcaagggcagc
tataatgtgaaggaagcctatctcgagaccgtggtcccgctgggccttggcctcgaattc
aacggcgccgtccgcgcgactgactattcgacctcgggctatgttaccacatggaagctt
ggcgcaacctgggcgccgatcgaggatatccgctttcgtgtcacgcggtcgcgcgacatt
cgcgcccccaacctcaacgaactgttccaggcgggcaccgccaacagcgattcggtgcgc
aacccggcgttcgttcaaggcgacccgaccagcggcccgcaattcttcccctattcgggc
ctgacaacgggcaatccggacctgaaaccggaaaaagccgattcatggaatatcggcgcg
gttgtcacgccgcgtttcctgcccggcttcagtgcatcggtcgattatttccgcatcgac
ctggaagatgccatcgacacgatctcagcacaggaaatcgtcaaccgctgcgacgaaggg
cgacaggaatattgcgacgcgatcaccgaggatccggcgcgcgaacaaccggggccgccg
cgcgtcccctatctcctgatccgcagccagcccttcaatttcgtcagcaagctggtgcgc
ggcatcgacttcgacgcggcctaccgactgccggtcggcggagaaagcagcatcacgctg
cggggtaacgcgacgcgctatatcgagaatctgtcggacaccggcattgccggggtaacg
ccggtcaataccgtaggcgcgaacggcagccagtcggcaacgccgaaatggatctttcgc
ggcagcctcatctatgaaaatccggctttctcgggcacgattaccggtcggggcgtcagt
tcgggcaaatatctggcaaacgccatcgaatgcacgagcggctgcccgacttcgaccagc
caggcgccgacctatgacaacaaccacgtcaagggcaccttctacgtcgatctcaatctg
acgcagaaggtccggatgcagagtggatcgcaggccgaactctttttcaacgtgaccaat
ttgttcgacgccgatccgctgctcctacctgaaaccggcttggctgcgaacagcacctat
tcggaccttctcggccgccagttccgcgtcggaatccggttcaggacgaagtga
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