Sphingopyxis sp. PAMC25046: E5675_17620
Help
Entry
E5675_17620 CDS
T06315
Name
(GenBank) OmpA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
sphx
Sphingopyxis sp. PAMC25046
Brite
KEGG Orthology (KO) [BR:
sphx00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sphx02000
]
E5675_17620
Transporters [BR:
sphx02000
]
Other transporters
Pores ion channels [TC:
1
]
E5675_17620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
OMP_b-brl
Surface_Ag_2
OmpA_membrane
Motif
Other DBs
NCBI-ProteinID:
QCB56071
LinkDB
All DBs
Position
complement(3736817..3737932)
Genome browser
AA seq
371 aa
AA seq
DB search
MRKLAVAVALASTTLASPVLARDNSWYVGVGAGAMLVEDLDLDIGTFNNAGTLDHRAGYD
VEGTVGYDFGGFRAEVEVGYREADIKSGRFTSPGIPSRADGTGAFTGSADLNGDSNALSF
MVNGLLDFGDDDGLQGFVGGGVGVARVSVEPVLAGPFLDDSDTGFAWQAIAGVRAPLSDS
IDVGLKYRFFNADNLDLVDQAGRDVSTRFRSHSILGTLTFNFGGAEPPPPPAPPPPPPPP
PPPPPPPPPPPVVECAPGPYIVYFDWDQSNITPEAASTLDNAISAYNRGCTGTQVMLAGH
ADRSGSATYNVGLSNRRNDAVRSYLTARGISDGSISAQGFGETRPAVATADGVRNDQNRR
VEITYGPNSGM
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgaggaagcttgccgtcgctgtggcgttggcctccaccaccctggcgtcgccggttctg
gcgcgcgacaactcctggtatgttggtgttggtgccggcgcaatgctcgtcgaggacctg
gatctcgatatcggcaccttcaacaatgccggtacgctcgatcatcgcgctggctatgat
gtcgaaggtaccgtcggttatgacttcggcggtttccgcgcggaagtcgaagtcggttac
cgcgaagccgacatcaagtcgggccgcttcacgagcccgggtattccgagccgcgctgac
ggcaccggcgctttcaccggtagcgctgatctgaacggcgattcgaacgcactcagcttc
atggtcaacggtctgctcgacttcggcgacgacgatggtcttcagggctttgtcggcggt
ggtgtcggtgttgcccgcgtttcggtcgaacccgttctggcaggcccgttcctcgacgat
tcggacacgggctttgcctggcaggcgatcgcgggtgtccgcgctccgcttagcgacagc
atcgatgtcggcctgaagtatcgtttcttcaacgccgacaacctcgatctggtcgaccag
gcgggtcgcgacgtttcgacgcgcttccgttcgcactcgatcctcggcacgttgacgttc
aacttcggtggtgcagagccgccgccgccgccggctccgcccccgccgcccccgccgccc
ccgccgcccccgccgcctccgccgccgccgccggtcgtggaatgcgcgcctgggccgtac
atcgtgtatttcgactgggatcagtcgaacatcacgccggaagcggcttcgaccctcgac
aacgcgatcagcgcctacaaccgtggttgcacgggtacgcaggtcatgctcgccggtcac
gccgaccgttcgggttcggccacgtacaacgtcggcctgtcgaaccgccgcaacgacgcg
gttcgcagctacctgacggctcgtggcatttcggatggctcgatcagcgcgcagggcttc
ggcgaaacccgcccggccgttgcgaccgccgatggtgtccgcaacgaccagaaccgtcgc
gtggaaatcacttacggtccgaactcgggcatgtaa
DBGET
integrated database retrieval system
