Sphingopyxis sp. PAMC25046: E5675_18340
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Entry
E5675_18340 CDS
T06315
Name
(GenBank) RluA family pseudouridine synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
sphx
Sphingopyxis sp. PAMC25046
Brite
KEGG Orthology (KO) [BR:
sphx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sphx03009
]
E5675_18340
Enzymes [BR:
sphx01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
E5675_18340
Ribosome biogenesis [BR:
sphx03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
E5675_18340
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
QCB56199
LinkDB
All DBs
Position
3915683..3916885
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AA seq
400 aa
AA seq
DB search
MSEPKPKLDGATVAEEDDGIRLDRWFKRHREGTPHALLARWARSGQLTLDGRKADVSDRI
STGQKLVMPTPPVETAARPARKGRPLTDADIELATGMMIHRDASAIVLNKLPGLATQGGT
KTEQHVDGLLDALKFDGPTRPKLVHRLDKDTSGALLIARTPRAAAYFAKSFSNRSAKKTY
WALIVGVPDIQQGEIDLPLAKQPGSGGEKMHVHDSGLASKTRYRVIERAGNSAAWVELQP
LTGRTHQLRVHMAAIGHPIVGDGKYGGKGAFLTGSISRKMHLHSRRLRIDHPDGGAIDVH
AEVPEHFAASLDALGFDLLLGEIGIDDIAKGPPPKAAEKAAAKAHSKQIRKARRGERRGR
TATSKPTDHVGKPKPKAKIGKPTARKPGTKKPQPRPARPR
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagcccaagccaaagctcgacggcgcgaccgtcgccgaggaggatgacggcatc
cgcctcgaccgctggttcaaacgccaccgcgagggcacgccgcacgccttgctcgcgcgc
tgggcgcgctcgggacagctcacactcgacggcaggaaggccgatgtgtcggaccgcatc
tcgacggggcaaaagctcgtcatgccgactccgccggtcgaaaccgcggcgcgcccggcg
cgcaagggccgcccgctgaccgacgccgatatagaactcgcaaccgggatgatgatccac
cgcgatgcgagcgcgattgtgctcaacaagctgcccggccttgcgacgcagggcggcacc
aagacagagcagcatgtcgacggcctgctcgacgcgctgaaattcgacggcccgacgcgg
cccaagctggtgcaccggctcgacaaggatacctcgggcgcgctgctgatcgcgcgcacc
ccgcgcgccgccgcctatttcgccaaaagcttttcgaaccgcagcgcgaagaaaacctac
tgggcgctgatcgtcggcgtacccgacatccagcaaggcgagattgacctgccgctcgcc
aagcagccgggatcgggcggcgagaagatgcacgtgcatgacagcgggctcgcatcgaag
acgcgctaccgcgtgatcgaacgtgcggggaacagcgcggcgtgggtcgagctgcaaccg
ctcaccgggcgcacgcaccaactccgcgtccatatggcagcgatcggccacccgatcgtc
ggcgacggcaaatatggcggcaagggtgccttcctgaccggctcgatcagccgcaagatg
catctgcacagccgccgcctgcgcatcgaccatcccgacggcggcgcgatcgacgtgcat
gccgaagtgccagagcatttcgccgcgagcctcgacgcgctcggctttgacctgctgctc
ggcgaaatcggcatcgacgacatcgccaagggcccgccgcccaaagctgccgaaaaagcc
gccgccaaggcgcacagcaagcagatccgcaaggcgcggcgcggcgagcggcgcggccgc
accgcgacgagcaagccgaccgaccatgtcggcaagccgaaacccaaagcgaagatcggc
aagccgacggcgcggaagcccggcacgaagaaaccgcagccgcgtccggcgcggccgcgc
tga
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