Sphingopyxis sp. PAMC25046: E5675_19220
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Entry
E5675_19220 CDS
T06315
Name
(GenBank) A/G-specific adenine glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
sphx
Sphingopyxis sp. PAMC25046
Pathway
sphx03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sphx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
E5675_19220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphx03400
]
E5675_19220
Enzymes [BR:
sphx01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
E5675_19220
DNA repair and recombination proteins [BR:
sphx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
E5675_19220
Prokaryotic type
E5675_19220
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
NUDIX_4
HHH
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
QCB56348
LinkDB
All DBs
Position
4090170..4091195
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AA seq
341 aa
AA seq
DB search
MNFSSRLLGWYDRSARILPWRIAPGSAESPDPYRVWLAEVMLQQTTVAAVAGYFARFTAR
WPTVADLAAADDADVMAAWAGLGYYARARNLLACARAVVADHGGIFPDSEAGLRALPGVG
DYTAAAVAAIAFGRPAVVVDANIERVIARHRLITTPLPTAKREIRVALTPLVPPSRPGDF
AQALMDLGATVCTPRSPACAICPVMADCRARGRLDIELLPVKPPKKAKPHRHGLAWWIER
DGAIWLVRRPDKGMLGGMRALPGGDWSDEPPPESGIVRVDHGFTHFDLTLALVRRDAPPK
ASAEAPDAAAEGIWWPIAELDAAGLPTLYRKLTDKMLERDV
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgaacttttcgagccgcctgctcggctggtacgaccggtcggcgcgcatcctgccgtgg
cggatcgcaccgggaagtgcggagagccccgatccttatcgcgtctggctcgccgaggtg
atgctgcagcagacgaccgtcgccgcggtcgcgggctatttcgcgcgcttcacggcgcgc
tggccgacggtcgccgacctcgccgccgccgacgacgccgacgtcatggcggcgtgggcg
gggctcggttattatgcccgcgcgcgcaatttgctcgcttgcgcgcgcgccgtcgtcgcc
gatcatggcgggatttttcccgatagcgaggcggggttgcgcgcgctgccgggggtcggc
gactataccgccgcggcggtcgcggcgatcgcctttgggcgaccggcggtcgtcgtcgat
gccaatatcgagcgcgtgatcgcgcgccaccggctgatcacaaccccgctgccgacggcg
aagcgcgagattcgcgtcgcgctgacgccgctggttcccccaagccgcccgggcgatttt
gcgcaggcgctgatggatcttggcgcgaccgtctgtacaccgcgctcgcctgcctgcgcg
atctgcccggtgatggccgattgccgcgcgcgcggtcggctcgacatcgagctcctgccg
gtcaagccgccgaagaaggcgaagccgcatcgccacgggctggcctggtggatcgagcgc
gacggcgcgatctggctcgttcggcggcccgacaagggaatgctgggcggaatgcgcgcg
ctgcccggcggcgactggtcggacgaaccgccacccgagtcgggaatcgtccgcgtcgac
catggtttcacccatttcgacctgacgctggcgctggtgcgccgcgacgcgccgcccaaa
gcctccgccgaagcgccggatgccgcagcggaaggcatatggtggccgatcgcggagctt
gacgccgccggactgccgacgctctatcgcaagctgaccgacaagatgctggagagggat
gtatga
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