Sphingorhabdus sp. YGSMI21: CHN51_01240
Help
Entry
CHN51_01240 CDS
T05308
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sphy
Sphingorhabdus sp. YGSMI21
Brite
KEGG Orthology (KO) [BR:
sphy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sphy02000
]
CHN51_01240
Transporters [BR:
sphy02000
]
Other transporters
Pores ion channels [TC:
1
]
CHN51_01240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
ATW02309
LinkDB
All DBs
Position
259070..261400
Genome browser
AA seq
776 aa
AA seq
DB search
MTKYTPAALSRPSLIALASALFLAGTAPAVAQTGTDDIADDSDGDVIIVTAQKIEQKSTD
VPITISANTGERMKELGVSDLDELSNYVPGLNIQEQSANNPGVVIRGITSDSGSAQQAAR
VTLYYNGVDISRSRGSYQDLYDIDRVEVIKGPQATLFGTASAVGAISIISARPEPGFSGE
VSASYGNYDAYTLGGHLNAGNDVIAVRVAAAHKKRDGYVTNLAPNQEDLYAQDQLGARAS
FRFTPSSTFTADLILTYDRQRNSGTPFISGTLPTSAGPADPFGVADMRGSPFSAAVLGDA
DLGLTRDVYDANLTMSWDFADEWNITMVNGFRKFNSNEVFDADGSAAYFLEFAEDANGEQ
GSHETRFTYNNGSTFRGSFGWNFFREDNSQRVPFSTDEVTYFQCLANAVVAGVACVDDNG
VPAGDAIRDLTGGAVDTIPYQAVFENLGKNDSYSVFADGTWIATPRVELTAGVRVLIEKR
RSGYRATAPGSVFTGAPPFAITDTAGQTFRTEDSFSAVLPRFNILYRFSDQINGFATISK
GRRSATVNAGATATPTGPVGDFSDIAPETVWNYEVGLKGAAGPFSGSIGVYYQVYDNFQV
TVADPARPGTTTTLSAGSASNFGVEAEVNVRAADWLNLFANIGYIDGGIDDKPGNGNLAG
SRFRLQPQVQAAAGFTIDYPINDSTRFFATPSVTHRSRVYFEAPNNILTSQKAVTLVNLR
AGLSFADERFEIAGFVRNLTNKDYLLDAGNTGGAFGIPTFIPAEPRFYGVQASAKF
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaatatactcccgccgccctgtcccgtccctctttgatcgcgctcgccagcgcg
ctgttccttgccggaaccgccccggccgtggcgcagaccggcaccgatgatatcgccgac
gacagcgacggcgacgtcatcatcgtcaccgcccagaagatcgagcagaagtcgaccgat
gtgccgatcaccatctcggccaataccggcgagcggatgaaagaactcggcgtgtccgat
ctcgacgaattgtccaactatgtccccggcctcaatatccaggagcaaagcgccaacaat
ccgggcgtcgtgatccgcggcatcacctcggacagcggctcggcgcagcaagccgcccgc
gtcacgctttactataatggcgtcgatatctcccgctcgcgcggttcctatcaggatctc
tacgatatcgaccgggtcgaggtgatcaagggcccgcaggcgaccctgttcggcacggct
tctgcggtcggcgcgatcagcatcatttccgcccggcccgagcccggcttctccggcgag
gtcagcgccagctatggcaattatgacgcctatacgctgggcggccatctcaacgccggc
aatgatgtgatcgcggtgcgggtcgctgctgcgcacaagaagcgcgacggctatgtcacc
aatctcgcccccaatcaggaggatctttatgcgcaggaccagctgggtgcccgcgcatcc
ttccgcttcacgccgagcagcaccttcaccgcagacctgatcctgacctatgaccggcag
cgcaattcgggcacgccgttcatttccggcaccctgccaaccagcgccggaccggccgat
cctttcggcgtcgccgatatgcgcggttcgcccttctctgccgccgtgctgggcgatgca
gaccttggcctgacccgcgatgtctatgatgccaatctgacgatgagctgggactttgcc
gacgagtggaacatcaccatggtcaacggtttccgcaagttcaattccaacgaagtgttc
gacgccgacggctccgccgcctatttcctggaatttgccgaggatgccaatggcgaacag
ggcagccacgaaacccgcttcacctataataatggcagcacgtttcgcggcagcttcggc
tggaatttcttccgcgaggacaatagccagcgggttcccttctcgaccgacgaagtgacc
tatttccagtgcctggccaacgccgtcgtcgccggcgtagcttgcgtcgatgacaatggc
gtgccggccggagacgcgatccgcgatctgaccggcggagctgtcgacaccattccctat
caggcggtgtttgaaaatctcggcaagaatgacagctattcggtgttcgccgacggcacc
tggatagcgacacccagagtcgagctgaccgcgggcgtccgggtgctgatcgagaagcgc
cgctcgggctatcgcgccaccgcaccgggttccgtctttactggtgcgccgccctttgcg
atcaccgacaccgccggccagaccttccgcaccgaggacagtttctccgccgttttgcca
cgcttcaatattctttatcgcttctccgaccagatcaacggcttcgccaccatctccaag
ggccgacgttcggcgacggtgaacgccggcgccaccgccacgcccaccggaccggtcggc
gacttcagcgatatcgcgccggaaaccgtatggaattatgaagtcggcctgaaaggggcc
gcggggccattttccggttcgatcggcgtttactatcaggtctatgacaatttccaggtc
acggttgccgatccggccagaccgggcaccacgaccacgctgagcgccggtagcgccagc
aatttcggggtcgaggccgaggtcaatgtccgcgccgccgactggctgaacctgttcgcc
aatatcggctatattgacggggggattgatgacaagccgggcaacggcaatctggcgggc
tcgcgctttcggctccagccccaggtgcaggcagcggccggcttcacgatcgactatccg
atcaatgacagcacccgcttctttgcgacgcccagcgtcacccatcgcagccgggtctat
tttgaagcgccgaacaatattctgaccagccagaaagcggtcacgctggtcaacctgcgc
gcgggcctgtcctttgccgacgagcggttcgaaattgccggttttgtccgcaatctgacc
aataaggactatcttctggacgcgggcaacaccggcggcgcctttggcatcccgaccttc
atcccggccgaaccgcgcttctacggcgtccaggccagcgccaaattctag
DBGET
integrated database retrieval system
