Sphingorhabdus sp. YGSMI21: CHN51_02465
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Entry
CHN51_02465 CDS
T05308
Name
(GenBank) alginate lyase
KO
K20525
oligo-alginate lyase [EC:
4.2.2.26
]
Organism
sphy
Sphingorhabdus sp. YGSMI21
Brite
KEGG Orthology (KO) [BR:
sphy00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
CHN51_02465
Enzymes [BR:
sphy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.26 oligo-alginate lyase
CHN51_02465
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Motif
Pfam:
Hepar_II_III_C
Alginate_lyase
Alg17C_C
Motif
Other DBs
NCBI-ProteinID:
ATW02511
UniProt:
A0A2D3R9Z0
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Position
complement(528723..530906)
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AA seq
727 aa
AA seq
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MKGKLIAVALWSAASSAAVAGQVESSPTGSAAAAQYYSPLFKDELDRARTFVDQMMAAGV
VVPVPSDPGGGYTHEQHKRNYKAIYEGGQLYRITGEQKYADYVRDMLLAYADLYPTLDEH
PARKNSQSSGRIFWQVLNDAMWMVHGIQGYEAIRDSLSEADRKNIDDNLFRKAAAFLSTG
SAVTFSKIHNHATWATAGVGMTGYVLGDKELVDIALLGLDKSGETGFLRQSELLFSPDGY
YTEGPYYQRFALKPFVVFAGVIEKNDPARKIFEHRDGILLKALRTTIQLTYDGYFFPFND
AIKDKSLQTDELYHGVAIAYRKTRDPGLLSIAQWQGRTVLTDDGKLVADDLAAGKAGPFP
FKSLLLSDGPEGEQGAVAILREGDSTSGQALVAKNSSQGMGHGHFDKLSWQYYDNGNEIV
SDYGAARFLNIEAKDGGRYLPENESWAKQTIAHNTLIVDEKSHFDGDVKVADTIAPKQLY
FSKAEGAQISSAVIEGAYPDTRFTRTLALFSVDGLSAPLALDIVRVQSDSPHQYDLPLHY
QGHIMRVGFDTESHIAARPVLGTGNGYQHIWVDAVGKPQGQNGFVTTLLDGRFYTYRFVP
QRGAEAILAEIGANDPRFNLRREPMVIQRIRNAQNTTFVSILESHGRYDGAAEQTVGSDS
LIKSLSHESVNGSDIVIVEKLDGKKIALVVSYDSDAEKKHSVKLGDQMLNWTGFAARIDL
PAGKAKR
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgaagggtaagctcatcgcggtcgcactatggagtgctgcatcttctgccgccgtggca
ggccaggtcgaatcctccccgaccggttctgctgcggcggcgcaatattacagcccgctt
ttcaaagacgaactggatcgcgcgcggacctttgtcgatcagatgatggcggctggtgtc
gtcgttcccgttcccagcgatcccggcggcggctacacgcacgaacagcacaagcgcaat
tacaaggcgatctacgaaggcggccagctttaccggattaccggcgagcagaaatatgcc
gactatgtccgcgacatgttgctggcctatgccgatctctatccaactctggacgagcat
ccggcacgcaagaatagccagagttccggcagaattttctggcaggtgctgaacgatgcg
atgtggatggtgcacggcatccagggatatgaagccattcgtgacagcctgtcagaggcc
gaccgcaagaatatcgacgacaatctcttccgcaaggcagccgcattcctctccaccggc
tcggcggtgacgttcagcaagatccataaccacgccacatgggccacggccggtgtgggc
atgacgggctatgttctgggcgacaaggaactggtcgatatcgctctgctcgggctggac
aaaagcggcgagaccggatttttgcggcagagcgaactgctcttttcccccgacggctat
tataccgaagggccttattatcagcgctttgcattgaagcccttcgtggtttttgccggg
gtaatcgaaaagaacgatccggcgcgcaagatattcgagcatcgcgacggcatattgctg
aaggcgctgcgcaccacgatccagctgacctatgacggctatttcttcccgttcaacgat
gcgatcaaggacaaaagccttcaaaccgacgaactttatcacggcgtcgccattgcctat
cgcaagacacgcgatccgggactgctgtcgatcgcgcagtggcaggggcgcacggtgctg
accgatgacggcaagctggttgccgatgatctggccgccggcaaggctggccccttcccc
ttcaaatcgctgctgttgagtgatggacccgaaggcgaacagggcgcggtcgctatcctg
cgcgaaggcgatagtacaagcggtcaggcactggttgccaagaatagctcgcaaggcatg
ggacacggtcatttcgataagctgagctggcaatattatgacaatggcaacgagattgtc
agcgactatggcgccgcgcgtttcctgaatatcgaggccaaggacggcggccgttatctg
ccggagaatgaaagctgggcgaagcagaccattgcccacaatacgctgatcgtcgacgaa
aaaagccatttcgatggcgatgtgaaggttgcggataccattgcgccaaagcagctttat
ttttctaaagctgagggcgcgcaaatcagctccgccgtgattgagggcgcctatcccgac
acccgcttcacccggacattggcgctattctcggtcgacggcctatctgcgccgctcgct
ctggacatcgtgcgcgtgcagtccgacagcccgcatcagtacgacctgccgctgcattat
caggggcatatcatgcgggtcggctttgacaccgaatcccatatcgcggcgcggccggtg
ctgggaaccggcaacggctatcagcatatctgggtcgatgccgtcggcaagccgcagggg
caaaatggtttcgttacgacccttctcgatggacgcttctacacctatcgatttgtacca
cagcggggtgcggaagcgattctggcggaaatcggcgccaatgaccccaggttcaatctg
cgccgcgagccgatggtcatccagcggatcaggaacgcgcaaaatacgacctttgttagc
atattggaatcccacgggcgctatgacggggcggcggagcagacggttggcagcgacagc
ctgataaaatcactcagccatgaaagcgtcaatggttctgacatcgtcatcgtggaaaaa
ttggacggcaagaagatcgctcttgttgtgtcctacgattctgatgccgaaaagaagcat
tcggtgaagcttggtgatcaaatgttgaactggaccggatttgcagcgcgcatcgatctg
ccagctggaaaggcaaagcgatga
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