Sphingorhabdus sp. YGSMI21: CHN51_02865
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Entry
CHN51_02865 CDS
T05308
Name
(GenBank) ATP-binding protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
sphy
Sphingorhabdus sp. YGSMI21
Brite
KEGG Orthology (KO) [BR:
sphy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphy03400
]
CHN51_02865
DNA repair and recombination proteins [BR:
sphy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
CHN51_02865
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_10
ResIII
FtsK_SpoIIIE
TrwB_AAD_bind
AAA_16
AAA_22
SLFN-g3_helicase
CbiA
AAA_30
AAA_7
T2SSE
AAA_25
Zeta_toxin
Hydrolase
nSTAND3
AAA_19
DUF543
Motif
Other DBs
NCBI-ProteinID:
ATW02581
UniProt:
A0A2D3RA59
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All DBs
Position
620702..622282
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AA seq
526 aa
AA seq
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MADATEIFLGLGGGERQSLNLSRANRHGLIAGATGTGKTVTLQGLAESFSANGVPVFVAD
VKGDLAGISMAGSPQFKHADKLEGRAKELGMEDYAYSDNPAIFWDLYGKQGHPIRTTISE
MGPLLLARLMDLNDTQEGVLNIVFRFADEEGLLLLNLDDLQSMLAYTAENAKQLSAKYGN
VSKASVGAIQRQLLQLDSQGAGQFFGEPALEIDDFLKCDDQGRGYINVLAADQLMRSPKL
YATFLLWLLAELFESLPEVGDPKKPKLVFFFDEAHLLFDDAPKALEDKIEQVVRLIRSKG
VGVYFVTQNPVDIPQEVAGQLGNRVQHALRAFTPRDKKAIKAAADTFRINPELDVEEAIT
ELRVGEALVSTLLEDGAPSIVQRTLIKPPRSRLGPISAKERAIINSISPYENKYDEEVDR
HSAEEILAQKVIDATATAKEVEEKGEEEVRKQPRKSKSIWEKALSRGAKVAMGSAAGMAA
STMLGKKSRANPMRTGVTSAVGSVVTDLAGPVAGRFVRNLIGGLMR
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggccgatgcaacagaaatatttctcggactgggcggcggcgaacggcaaagcctcaat
ctctcccgcgccaaccggcacggcctgatcgcgggcgcaaccggcaccggtaaaacggtc
acgctgcaggggctggccgaaagcttctccgccaatggcgtcccggtcttcgtcgccgat
gtaaaaggcgatcttgcgggcatttcgatggccggttctccccagttcaaacatgccgac
aagctggaaggacgggccaaggaactcggcatggaggattatgcctattccgacaatccg
gccatattctgggacctctatggcaaacagggccatccgatccgcaccacgatcagcgaa
atggggccgttgctgctcgcccgcctgatggacctgaatgacacgcaggagggcgtgctc
aatatcgtcttccgctttgccgatgaagaaggattgctgctgctgaaccttgacgatctg
cagtcgatgctcgcctacaccgcggaaaatgcgaaacagctgtccgccaaatatggcaat
gtcagcaaggccagcgtcggcgcgatccagcgccagctgctccagctcgacagccaaggc
gccggccagtttttcggggaaccggcgctggaaatcgacgattttctgaaatgcgacgac
cagggtcgcggctatatcaacgtcctcgccgccgaccagctgatgcgcagcccgaaactt
tacgcaaccttcctgctctggctgctcgccgaactgttcgagagcctgccggaggtcggc
gatccgaaaaaaccgaagctggtcttcttctttgacgaagcgcatctgctgttcgacgat
gcgccgaaagcgctggaagacaagatcgaacaggtcgtgcgcctgatccgctcgaaaggc
gtcggcgtctatttcgtcacccagaacccggttgatataccccaggaagtcgccggccag
cttggcaatcgcgtgcagcacgctctgcgcgctttcactccgcgcgataaaaaagcgatc
aaggcggcggccgacacattccggatcaaccccgaactggatgtcgaggaagccattacc
gaattgcgcgtcggtgaagcgctcgtctccactctgctggaagacggtgcgccgtcgatt
gtccagcgcacgctgatcaaaccgccgcggtcacggctgggaccgatctcggcaaaagag
cgcgccatcatcaattcaatctcgccctatgaaaacaaatatgacgaagaggttgaccgg
cacagcgccgaggaaatactcgcgcaaaaggtgatcgacgccacggcaacggcgaaggaa
gtagaggaaaaaggcgaagaggaagtccgcaaacagccgcgcaagagcaagagtatctgg
gaaaaggcgctcagccgcggggcaaaggtcgccatgggttcagccgcgggcatggccgcc
tcaaccatgttgggcaagaaatcgcgcgccaatccgatgcggaccggcgtgacttcggca
gtgggttcagtggtgacagatctggccggtcccgtggcggggcgctttgttcgcaatctg
atcggtggcctgatgcgctga
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