Sphingorhabdus sp. YGSMI21: CHN51_02885
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Entry
CHN51_02885 CDS
T05308
Name
(GenBank) cryptochrome/photolyase family protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
sphy
Sphingorhabdus sp. YGSMI21
Brite
KEGG Orthology (KO) [BR:
sphy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphy03400
]
CHN51_02885
Enzymes [BR:
sphy01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
CHN51_02885
DNA repair and recombination proteins [BR:
sphy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
CHN51_02885
BRITE hierarchy
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Paralog
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GFIT
Motif
Pfam:
DPRP
RNB
Motif
Other DBs
NCBI-ProteinID:
ATW05353
UniProt:
A0A2D3RHZ2
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All DBs
Position
624473..626011
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AA seq
512 aa
AA seq
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MSEKILIPILGDQLSMDISSLKGQNPEDCILLMMEVEDETTYVRHHKAKIAYILSAMRHH
AKALAERGWSVDYVNLTDPDNHGSFSGEIARALERHRIDRIRITEAGEWRVMAMIENWED
QFAIPVSVCPDRRFIATHQDFTNWAEGKKQLRMEYFYREMRRKTGILLDRNGKPEGGKWN
YDSANRKPARGDLSIPQPIRFRPDDLTEQVLAMVAEEFPSHPGSLDQFHFAVTHEEAMRQ
KRKFLDEALPKFGDYQDALLSGEPFLWHSILSPYINAGLLDPLDLCHEVEQRYRNGDVPL
NAAEGFIRQIIGWREYMRGIYWREGPEYVDRNFLEAKRPLPEFYYSGDTDMHCLSEAIGQ
TLDLAYAHHIQRLMITGNFALIAGLEPQAVHQWYLEVYADAYEWVELPNTLGMSQFADGG
IIASKPYASSGNYINKMSDYCQSCHYDVKKRVGERACPFNALYWDFLDRNQNRLADNNRL
VMPYRTWEKMESETRDDIRRQAKRFLDQLEEN
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagaaaattctcataccgatattgggcgatcagctctcgatggatatctcgtcc
ctaaagggacaaaatccggaagactgcatcttgctgatgatggaggtcgaggacgaaacg
acctatgtccggcaccacaaggccaaaattgcctatatcctgtcggccatgcgccaccat
gccaaggcgctggcagagcggggatggtccgtcgattatgtgaacctaaccgaccccgat
aaccacggcagcttttccggagaaatcgcacgagcgctggagcggcatcgcatcgaccgg
atacggattacagaggccggtgagtggcgggtcatggctatgatcgaaaactgggaggac
cagttcgccattccggtctctgtgtgcccggaccgccgttttatcgcgacgcatcaggat
ttcaccaattgggcagagggcaaaaagcagctgcggatggagtatttctaccgcgaaatg
cggcgaaagaccggcatccttctcgaccggaacggcaaaccggaaggcggcaaatggaat
tatgacagtgccaatcgcaagccagccaggggcgacctgtccattccccagccgatccgc
tttcggccagatgacctaaccgagcaggttctggccatggtggcggaagaatttcccagc
catccgggatctttggaccaattccactttgccgtaacccatgaagaagccatgcggcaa
aagcgcaaatttctggatgaggctttgccgaagttcggcgattatcaggatgccttgctc
agcggagagccgtttctctggcactcgattctgtctccctatatcaatgcagggcttctc
gacccgctggatctctgtcacgaggtggaacagcgctaccggaatggcgatgtgccgctc
aacgccgcggaaggattcatccggcaaatcatcgggtggcgtgaatatatgcgcggcatt
tactggcgcgagggacccgaatatgttgatcgcaactttctggaggccaaacggccgttg
ccggaattttactattcgggcgacaccgatatgcattgtttgtccgaagccatcgggcag
acgctggacctggcttatgcccaccatatccagcggttgatgataaccggcaatttcgcg
ctcatcgcgggtctggaaccgcaggcggtccaccaatggtatctggaagtctatgcagac
gcctatgagtgggttgaactgcccaatacgctgggcatgagccagtttgccgacggcggc
atcatcgcatccaaaccttatgcttcgtccggcaattacatcaacaaaatgtcggattac
tgccagagctgccattatgacgtgaaaaagcgtgttggtgagagggcatgccccttcaac
gcgctatattgggattttctggaccgcaaccagaacaggctggccgataacaatcgcctg
gtgatgccgtaccggacttgggaaaaaatggaatcggaaacgcgggacgatattcgccgg
caggcgaaaaggttcctcgatcaactggaggaaaactga
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