Sphingorhabdus sp. YGSMI21: CHN51_03890
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Entry
CHN51_03890 CDS
T05308
Name
(GenBank) hypothetical protein
KO
K17675
ATP-dependent RNA helicase SUPV3L1/SUV3 [EC:
5.6.2.6
]
Organism
sphy
Sphingorhabdus sp. YGSMI21
Brite
KEGG Orthology (KO) [BR:
sphy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
sphy03029
]
CHN51_03890
Enzymes [BR:
sphy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
CHN51_03890
Mitochondrial biogenesis [BR:
sphy03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
CHN51_03890
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEXQc_Suv3
Helicase_C
MoCoBD_2
Motif
Other DBs
NCBI-ProteinID:
ATW02765
UniProt:
A0A2D3RAM1
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All DBs
Position
complement(817201..820011)
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AA seq
936 aa
AA seq
DB search
MSPFSQSSLVAVLGPTNTGKTHLAIERMCAHSSGMIGFPLRLLAREVYDRVVALKGVNRV
ALVTGEEKIIPKDAQWFLCTAEAMPMDREFAFVAIDEAQIGIDPERGHIFTDRMLHARGR
EETMILGSESLRPLIEALLPDAEIVTRPRFSTLSYAGPRKLSRLPRRSAIVAFSLEDVYA
IAEMLRRQHGGAAIVMGSLSPQTRNAQVKMYQDGEVDYLVATDAIGMGLNLDVTHVAFAA
LKKFDGRRRRPLTLAEIGQIAGRAGRHQKDGSFGVLTGLATSDELQPEDIENLESHHFPK
LEWLYWRNAEPDFGSVDRLIGSLEEFPQGRRLQAAPEAVDLAVLKRLAQDQAVAGLAQSP
DKIRLLWEAASIPDFRKVGADHQARFVASLWPHLASGSGRIPHARMAQEIARLENVQGDI
ATLGARIAAARSWSYIAQKSRWVEQPEAMVDRTRALESRLSDAMHSQLTQRFVDKRTRVL
MRGLLKDMLHQDVIVDDDGKVLVEGQEIGTLKGFQFVVPSDSRREDRKMLLAAAERYLGR
IMTDNADALAKAPDSVLELVADSAGQPAILWGDSRLAVLTKGKTLLQPEIRFERSIKDMT
PEDSQKVMDRVKAWVDSMKAKHLQGLVKIDALANEPATPPAVRALFAQIVDAGGILSRRE
IDQAVRALDNDMRGHARRAGLVFGALDIFHHALMKPGAVLWRTALFAAYDEEPMIEQAPD
NAVHLKQGTFSSAGHATRLGFRRIADEYVRVDMVERLVKQAHEARKQDAVFAVDSALATS
LGLSKACHEALLDLAGFVKTDDKPAPVEAPAAAADPVVPADAEATASQEASAADTGTEAE
KPATPDAVADTADAAKATVEEVSSDAESDPAEPAPAVQYWRWKGMARKKNQSYFKPREKH
QKKNKGAPAKRKAEPVLATAGGAFAELAALRDSMKK
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atgtccccgttttcccagtcgtctcttgtcgccgttctcggcccgaccaacaccggcaaa
acccatcttgccatcgagcgcatgtgtgcccattcgagcgggatgatcggctttccgctg
cgcttgctggcgcgcgaggtctatgaccgggttgtggcgctgaaaggtgtcaaccgggta
gcgctggtcacgggtgaggaaaagatcattccgaaagacgcgcaatggttcctgtgcacc
gcagaagcgatgccgatggaccgggaattcgcctttgtcgcgatcgacgaggcgcaaatc
ggcattgatcccgaacgcggccatattttcaccgaccggatgctgcacgcgcgcggccgc
gaggaaacgatgatcctcgggtccgagagcctgcgcccactgatcgaggccttgctgccc
gatgccgaaatcgtcacccggccccggttttcgaccctcagctatgccggcccgcgcaag
ctctcgcgcttgccgaggcgttcggccatcgtcgccttctcgctcgaggatgtatacgcg
atcgccgaaatgctgcggcgccagcatggtggcgcggcgatcgtcatgggcagcctgtcg
ccgcagacccgcaacgcccaggtcaaaatgtaccaggacggtgaagtcgactatcttgtc
gccaccgatgcgatcggcatggggctcaatctcgacgtcactcatgtcgcctttgccgcg
ctgaagaaattcgacggtcgccgccgccggccgctcaccctggcggaaatcggacagatt
gccgggcgcgccggccggcaccagaaggacggtagtttcggcgtgctgaccggccttgcc
acgtcggacgaactgcagccggaggatatcgaaaatcttgaatcgcatcatttcccgaag
ctggaatggctctactggcgcaacgccgagccggatttcggttcggtcgaccgcctgatc
ggctcgctggaggaatttccgcagggtcgccggttgcaggcggctccggaagcggtcgat
ctggcggtattgaaacggctggcgcaggatcaggcggtggccggtctcgcgcaatcaccc
gacaagatccggctgctctgggaagcggcctccatcccagattttcgcaaggtcggtgcc
gatcaccaggcgcgcttcgtcgcttcgctctggccgcatctcgccagcggatcgggtcgc
attccccacgcccggatggcgcaggaaattgcccggctggaaaatgtccagggcgatatc
gccactttgggcgcgcggatcgctgccgcgcgcagctggagctatatcgcgcaaaagtcc
cgctgggtggaacagcccgaagcgatggttgaccggacccgggcgctggagtcgcgcctc
agtgatgccatgcacagccagctgacccagcgtttcgtcgacaagcggacacgggtgttg
atgcgcggtctgctgaaagatatgttgcatcaggatgtcatcgtcgatgacgatggcaag
gtcctggtcgagggacaggaaataggaacactcaagggctttcaatttgtcgtgccttcc
gatagccggagagaagatcgaaaaatgctgctggctgcggcagaaagatatttgggacgg
attatgacggacaatgcagacgctcttgccaaggcaccggactccgttctggagctggtt
gccgattcggccggacagccggcaatcctctggggcgacagccggcttgcggtcctgacg
aagggcaagacgctgttgcaacccgagatcaggttcgagcgctcgatcaaggatatgacg
cccgaggacagccagaaggtcatggaccgggtcaaggcctgggttgattcgatgaaggcg
aagcatttgcaggggctggtcaagattgacgctcttgccaacgagccggcaacgccgccg
gcggtgcgtgcgctgttcgcgcagattgtcgacgcgggcgggattctctcgcggcgcgaa
atcgatcaggccgtccgggcgctcgacaatgatatgcgcgggcacgcgcgccgcgccggt
ctggtattcggcgcgctcgatatttttcaccacgcgctgatgaagcccggtgctgtgctc
tggcggacggccttgtttgccgcctatgacgaagagccgatgatcgaacaggcgccagac
aatgcggtgcatctgaaacaggggacattctcctctgccggccatgccacgcgtctcggt
ttccgcaggattgccgacgaatatgtcagggtcgacatggtcgagcgactggtcaagcag
gcacatgaggcccgcaagcaggacgcggtattcgctgtggactcggctctggcaacatcc
ctcggcctgtcgaaagcctgtcatgaagcgctgctcgatctggcaggctttgtcaaaacc
gatgacaagccggcgccggtcgaagcgcctgccgctgcggcagatccggtggtcccggcg
gacgcggaggccacggcgtcacaggaagccagtgctgccgacaccggcacggaagcggaa
aagcctgccacaccggacgcggttgccgacacggcggatgcggcgaaagcgacagtggaa
gaggtttcttccgacgcagaatccgatccggcagaaccggcaccggccgttcaatattgg
cgctggaaaggcatggcgcgcaagaaaaaccaaagctatttcaaaccccgcgagaagcac
cagaaaaagaacaagggcgcgcccgccaagcgcaaggcggaaccggttctcgccaccgct
ggcggggcctttgccgagctggcggcgctccgggacagcatgaagaaatag
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