Sphingorhabdus sp. YGSMI21: CHN51_05135
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Entry
CHN51_05135 CDS
T05308
Name
(GenBank) leucine--tRNA ligase
KO
K01869
leucyl-tRNA synthetase [EC:
6.1.1.4
]
Organism
sphy
Sphingorhabdus sp. YGSMI21
Pathway
sphy00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sphy00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CHN51_05135
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sphy01007
]
CHN51_05135
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sphy03016
]
CHN51_05135
03029 Mitochondrial biogenesis [BR:
sphy03029
]
CHN51_05135
Enzymes [BR:
sphy01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.4 leucine---tRNA ligase
CHN51_05135
Amino acid related enzymes [BR:
sphy01007
]
Aminoacyl-tRNA synthetase
Class I (U)
CHN51_05135
Transfer RNA biogenesis [BR:
sphy03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
CHN51_05135
Prokaryotic type
CHN51_05135
Mitochondrial biogenesis [BR:
sphy03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
CHN51_05135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1_2
tRNA-synt_1
tRNA-synt_1g
Anticodon_1
tRNA-synt_1e
tRNA-synt_1f
Motif
Other DBs
NCBI-ProteinID:
ATW02986
LinkDB
All DBs
Position
1060082..1062610
Genome browser
AA seq
842 aa
AA seq
DB search
MTDQRFNPLAADKRWQERWASAGTFEADDASSKPRSYVLEMFPYPSGRIHMGHVRNYTMG
DVLARFRRMQGYEVLHPMGWDAFGMPAENAAMEKKVHPGEWTRANIASMRSQLKTLGFAF
DWSRELATCEPDYYGQEQALFIDLFEGGLVYRKESAVNWDPVDMTVLANEQVIDGKGWRS
GAPVEKRKLSQWFLKITDFAEDLLAGLGDLKGWPEKVRLMQENWIGKSQGLQFHFQLAEA
QGDIDSVEVFSTRPDTIFGASFVALSADHPLTQKLAGQNDALAAFAEECKAGGTTAAELE
TMEKKGFDTGLTVTHPLDPDWQLPVYVANFVLMDYGTGAVFGVPAHDQRDLDFARKYDLP
VKRVVSDGDETAAEYIGDEAYTGPGKIVNSAFLDGMTVEAAQQAIIDRAESEGWGKAQTT
WRLRDWGVSRQRYWGTPIPIIHCDACGPVPVPKDQLPIVLPEDIDFETPGNPLERHATWK
HVDCPKCGKAARRETDTLDTFVDSSWYFLRFASQPDDRPFDPEVVKQWLPVTQYIGGVEH
AILHLLYARFWTRALASIGKLDFAEPFESLFTQGMVTHETYKHGDGSWLSPDEVEKNGSD
WAVIADGSPVTTGRVEKMSKSKKNVVDPDPIIEQYGADAVRFFMLSDSPPERDLPWSEAG
IEGSWRFVQRLWRLFIAVADSEDTGEDKALRRKLHQTVAGVAGDVEALSFNKAVAKIFEL
VNLIEKSQPSADRTIAIKSLARIVAPMVPHIAEEAWALFGESDLVANAPWPEVDESLLVD
DEVTIAIQVRGKLRDTITVAKGSSKDQLEELALASEKVQRSLDGAEIKKVIVVPDRLVNI
VI
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatcagcgattcaatccactggcggcggacaaacgctggcaagagcgctgggcg
agtgccggcactttcgaggcggacgacgccagcagcaagccgcgcagctatgtgctcgag
atgtttccctatccctcgggccgcatccacatgggccatgtccgcaactatacgatgggc
gacgtgcttgcccggttccggcggatgcagggctatgaagtgctccacccgatgggctgg
gacgccttcggaatgccggcggaaaatgccgcgatggaaaagaaagtccatcccggcgaa
tggacccgggccaatatcgcctcgatgcgcagccagctgaagactctgggcttcgccttt
gactggagccgcgagctggcgacctgcgaaccggattattatgggcaggaacaggcgctt
ttcatcgatctgttcgaaggcggtctggtctatcgcaaggaatcggcggtcaactgggac
ccggtcgacatgaccgtgctcgccaacgaacaggtgatcgacggcaagggctggcggtcc
ggcgcaccggtggaaaagcgcaagctcagccagtggtttttaaagatcaccgattttgcc
gaggatctgctggccggactcggcgacctcaaaggctggccggaaaaagtgcggctgatg
caggaaaactggatcggcaagtcacagggcctgcaattccatttccagctcgccgaagcg
caaggcgatatcgacagcgtggaggtgttctcgacccggcccgacacgattttcggagcg
agttttgtcgcgctgtcggccgaccatccgctgacgcagaaactcgctggccagaatgac
gcgctcgcggccttcgccgaagaatgcaaggctggcggcaccaccgctgccgagctcgag
acgatggagaaaaagggcttcgataccggcctgaccgtcacccatccgctcgatcccgac
tggcaattgcccgtctatgtcgccaatttcgtgctgatggattatggcaccggcgcggta
ttcggcgtgccggcgcatgaccagcgcgatctcgactttgcccgcaaatatgacctgccg
gtcaagcgcgttgtctcggacggcgatgaaaccgctgccgaatatatcggggacgaggcc
tataccggtcccggcaaaatcgtgaacagcgcctttctcgacggcatgaccgtcgaagca
gcgcagcaggcgattatcgatcgcgcggaatccgaaggctggggcaaggcccagacgacc
tggcggctgcgcgactggggcgtatcgcgccagcgctactggggcacgccgatcccgatc
attcattgcgatgcttgcggtccggtgccggtgcccaaggatcagctaccgatcgtattg
cccgaagacatcgattttgaaactccgggcaacccgctggaacgccacgcgacatggaaa
catgtcgactgtcccaaatgcggcaaggcggcgcggcgcgagaccgacacgctcgacact
tttgtcgacagcagctggtatttcctgcgctttgccagccagccggacgaccggcccttt
gaccccgaagtggtcaagcagtggctgccggtgacacaatatatcggcggcgtcgaacat
gcgatcctgcatctgctctatgcccgattctggacgcgcgctctggcgagcatcggcaag
ctggattttgccgagccgttcgagagcctgttcacccagggcatggtgacccacgaaacc
tataaacatggcgacggcagctggctgtcgcctgacgaggtcgagaaaaacggtagcgac
tgggcggtgatcgctgacgggtcgccggtcaccaccggccgggtcgagaaaatgtcgaag
tcgaagaaaaatgtcgtcgatcccgatccgatcatcgaacaatatggcgccgatgcggtg
cgtttcttcatgctctccgacagcccgcccgagcgcgacctgccttggtcggaagcgggt
atcgaaggcagctggcgctttgtccagcgcctgtggcggttgtttatcgctgtcgcagac
agtgaagatacaggcgaagacaaggcgcttcgccgcaagctccaccagaccgtcgccggt
gtggctggcgatgtcgaagcgctgtcattcaacaaggcggtcgcgaagatattcgaactg
gtcaatctgatcgaaaaatcgcagccttccgcagaccggaccattgcgatcaagtcgctt
gcccggatcgtggcgccgatggtgccgcatattgccgaggaagcatgggccttgtttggc
gagagcgatctggtcgccaatgcaccatggccggaggtggacgaaagcctgctggtcgat
gacgaagtgacgattgcgattcaggtgcgcggaaaattgcgcgatacgatcaccgtggcc
aagggcagcagcaaggatcagctcgaagagcttgccctcgcttccgagaaggtgcagcgt
agcctcgacggagcggaaataaagaaggtgattgtcgtgcccgaccgactggtcaatatc
gtcatatga
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