Sphingorhabdus sp. YGSMI21: CHN51_05215
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Entry
CHN51_05215 CDS
T05308
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
sphy
Sphingorhabdus sp. YGSMI21
Pathway
sphy03030
DNA replication
sphy03430
Mismatch repair
sphy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sphy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CHN51_05215 (dnaQ)
03430 Mismatch repair
CHN51_05215 (dnaQ)
03440 Homologous recombination
CHN51_05215 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sphy03032
]
CHN51_05215 (dnaQ)
03400 DNA repair and recombination proteins [BR:
sphy03400
]
CHN51_05215 (dnaQ)
Enzymes [BR:
sphy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CHN51_05215 (dnaQ)
DNA replication proteins [BR:
sphy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CHN51_05215 (dnaQ)
DNA repair and recombination proteins [BR:
sphy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CHN51_05215 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Rv2179c-like
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
ATW03002
UniProt:
A0A2D3RBC7
LinkDB
All DBs
Position
complement(1073546..1074244)
Genome browser
AA seq
232 aa
AA seq
DB search
MREIIFDTETTGFDPQNGDRMVEIGCIEMINRVETGQTFHCYYNPQRSMPKAAEEVHGLS
DVFLSDKKLFSDGAEELLSFLQDSNLVAHNAQFDFKFLNAELVLCGYKPISQFRMIDTLA
IAKSKHPGAKLSLDALCSRYGIDRSHRVKHGALLDAELLTQLYIELTGGRQIGLGLADDA
RKQDPVRDMRPAARPAERKQFIAAREHHASEDELARHRIFIEGIENPLWSEV
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgcgagagataattttcgacaccgaaactactggctttgatcctcaaaatggtgaccgg
atggtggaaatcggctgtatcgaaatgatcaaccgggtcgaaaccgggcagaccttccac
tgctattataatccccagcggtcgatgcccaaggcggcagaggaagtccacgggctttcg
gacgtgttcctgtccgacaagaaactgttttccgacggcgccgaggaattgctgtccttc
ctgcaagattcgaatctggtggcccataatgcccagttcgatttcaagtttctcaacgcc
gaactggtcttgtgcgggtacaagccgatttcccagttccgcatgatcgacactttggcg
atcgccaaatccaaacatcccggtgcgaaactgtcgctggacgccttgtgctcgcgctac
ggcatcgatcgcagccaccgcgtcaaacatggcgctttgctggacgccgaactgctgacc
cagctttatatcgagctgaccggcggccggcagatcggactcggtctggccgatgatgcg
agaaagcaggatccggttcgcgatatgcggcccgcggcacggccggcagagcggaaacag
ttcatcgccgcgcgcgagcatcatgccagcgaggacgagctggcgcggcacaggattttt
atcgagggcatagaaaaccctctttggtctgaggtttag
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