Sphingorhabdus sp. YGSMI21: CHN51_05370
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Entry
CHN51_05370 CDS
T05308
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
sphy
Sphingorhabdus sp. YGSMI21
Pathway
sphy00071
Fatty acid degradation
sphy00280
Valine, leucine and isoleucine degradation
sphy00310
Lysine degradation
sphy00362
Benzoate degradation
sphy00380
Tryptophan metabolism
sphy00410
beta-Alanine metabolism
sphy00640
Propanoate metabolism
sphy00650
Butanoate metabolism
sphy00907
Pinene, camphor and geraniol degradation
sphy00930
Caprolactam degradation
sphy01100
Metabolic pathways
sphy01110
Biosynthesis of secondary metabolites
sphy01120
Microbial metabolism in diverse environments
sphy01200
Carbon metabolism
sphy01212
Fatty acid metabolism
Module
sphy_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
sphy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
CHN51_05370
00650 Butanoate metabolism
CHN51_05370
09103 Lipid metabolism
00071 Fatty acid degradation
CHN51_05370
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
CHN51_05370
00310 Lysine degradation
CHN51_05370
00380 Tryptophan metabolism
CHN51_05370
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
CHN51_05370
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
CHN51_05370
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
CHN51_05370
00930 Caprolactam degradation
CHN51_05370
Enzymes [BR:
sphy01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
CHN51_05370
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
CHN51_05370
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
CHN51_05370
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
2-Hacid_dh_C
NAD_binding_2
F420_oxidored
Sacchrp_dh_NADP
DUF2680
Shikimate_DH
DAO
AlaDh_PNT_C
ApbA
UDPG_MGDP_dh_N
RS_preATP-grasp-like
Motif
Other DBs
NCBI-ProteinID:
ATW03030
UniProt:
A0A2D3RBE3
LinkDB
All DBs
Position
complement(1105330..1107519)
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AA seq
729 aa
AA seq
DB search
MSYETFTVDIDSDGIALVTIDLPGQSMNVWNQALIADFKGFTEELISNDAIKGAVITSGK
KSGFLAGADLNMLGASKADSMAEAFESAWELNGMLRRMETGGHTAKELLKGTAHAKPVAC
ALNGLALGGGLELALACHYRVCADHPKIQLGLPEVQVGLLPGGGGTQRLPRLAGLQAAGM
AIMTGQPMNPQAALAQKIVDEVVPADEVVAKAKAWVKANPKASAPWDKKGYKFPGGAGSM
DPRAVPLYLGSSAIALKQSKGNFEAVKAILSCLYEGSMLPIDTALRVESKYFTKLLAGPQ
AKNMIRTLFINKQAAEKGAARPKGVPPSDIKTVGVLGAGLMGSGITHVTAKGGMNVIVLD
RNMEEAQKAIDYSQKIVDKGVKRGKMTQEKADAFMARITPTDNYDDLKDVDLIIEAVFER
PDVKADVIKKTEAVIGKDVVFASNTSTLPITGLAKNSERPDQFIGMHFFSPVEKMPLLEI
IPGAETGDKALAVALDYNAKIRKVPIVVKDVRGFYTNRVFPPYANEAMLMVAEGVKPALI
ENAAIAMGMPIGPLAVVDETTLQLGYDIMTSTKEEMGDAYVPSGTEDLMEIMVNKIDRRG
RRFGGGFYEYAEDGSKKLWPGLADHFPLAEEQPDVEEVKQRLMFIQLIATAQCFDEGVVS
DPQSADLGAIFGWGFAPWTGGPMSHIDTMGVDNFVRIADNLAQKYGERFKPPMSFREKAD
KGESFYQAA
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgagctacgaaacatttaccgtcgatatcgacagcgacggcatcgccctcgtcaccatc
gacctgcccggccagtcgatgaatgtctggaaccaggcgctgatcgccgatttcaaggga
ttcaccgaagagctgatcagcaacgacgcgatcaagggcgcggtgattacatcgggcaaa
aaatccggtttcctcgccggtgccgatctcaacatgctcggcgcatcgaaagccgacagc
atggccgaagcgtttgaaagcgcatgggaactgaacggcatgttgcgccgcatggaaacc
ggcggtcatacggcgaaggaactgctcaagggtacggcccatgccaagccagtggcctgc
gcgctgaacggccttgccctcggtggtggtctggagctggcactcgcctgccattatcgt
gtgtgcgccgaccatccgaaaatccagctcggcctgcccgaagtgcaggttggcctgcta
ccaggcggcggcggcacccagcgcctgccacgtctcgcaggccttcaggccgccggcatg
gcgatcatgaccggccagccgatgaacccacaggctgcactcgcgcagaagatcgtggat
gaagttgtcccggcggacgaagtcgttgccaaggccaaagcatgggtcaaggccaatccc
aaagcgtccgcgccatgggacaagaagggctataaattccccggtggtgccggatcgatg
gatccccgcgccgtgccgctctatctcggatcctcggccatcgcgctgaagcagagcaag
ggcaatttcgaagcggtcaaggcgatcctgtcctgcctctacgaaggctcgatgttgccg
atcgacaccgccttgcgcgtcgagagcaaatatttcaccaagctgctcgccggcccgcaa
gccaagaatatgatccgcaccctgttcatcaacaagcaggcagcggaaaaaggcgcggcc
cgtccgaaaggcgttccgccctccgatatcaagacggtcggcgttctcggtgccggcctg
atgggttccggcatcacccatgtcacggccaagggcggcatgaatgtcatcgtcctcgac
cgcaatatggaggaagcgcaaaaggccatcgattacagccagaagatcgtcgacaagggc
gtcaagcgcggcaagatgacccaggaaaaagccgatgccttcatggcgcggatcaccccg
accgacaattatgatgatctgaaagatgtcgacctgatcatcgaggctgtgttcgaacgg
cccgatgtcaaagccgatgtgatcaagaaaaccgaagcggtcatcggcaaggatgtggtc
tttgcatccaacacctcgacccttccgatcaccggccttgccaagaacagcgaacgtcct
gaccagtttatcggcatgcacttcttctcgccggtcgagaaaatgccgttgctggaaatc
atccctggtgccgaaaccggcgacaaggctctggccgttgccctcgattataatgcgaag
atccgcaaggttccgatcgtcgtcaaggacgtccgcggcttctacaccaaccgcgtcttc
ccgccttatgccaatgaagcgatgctgatggtcgccgaaggcgtgaagccggcgctgatc
gaaaatgccgccatcgccatgggcatgccgatcggtccgctcgccgtggtcgatgaaacg
acactgcagctgggctatgacatcatgacctcgaccaaggaagaaatgggcgacgcctat
gttccaagcggtaccgaggatctgatggaaatcatggtcaacaagatcgacaggcgcgga
cggcgctttggcggtggtttctacgaatatgccgaagacggttcgaagaaattgtggccc
ggccttgccgaccatttcccgctggctgaagaacagccggatgtcgaagaggtcaagcag
cggctgatgttcatccaattgatcgccaccgcgcaatgtttcgacgagggcgtcgtctcc
gacccgcagtccgccgatctcggcgcgatcttcggctggggctttgcgccctggaccggc
ggtccgatgagccatatcgacacgatgggcgtcgacaattttgtccgcatcgctgacaat
ctcgcgcagaaatatggcgaacggttcaaaccgccgatgagcttccgcgagaaagcggac
aagggcgagagcttctaccaggcagcttaa
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