Sphingorhabdus sp. YGSMI21: CHN51_05555
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Entry
CHN51_05555 CDS
T05308
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sphy
Sphingorhabdus sp. YGSMI21
Brite
KEGG Orthology (KO) [BR:
sphy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sphy02000
]
CHN51_05555
Transporters [BR:
sphy02000
]
Other transporters
Pores ion channels [TC:
1
]
CHN51_05555
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
ATW03064
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Position
1147012..1149537
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AA seq
841 aa
AA seq
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MRRIKTALSLSAGFAALVSFNPALAQTGGEQDASEGQDSNVIIVTARRQDELLAEVPASV
TVFTADMLDRTGVQQADEFVQLTAGVTIVSGTAEAGDTQINIRGINGARDAESSVALVVD
GILKTNTAQLNQDQGTLRQIEILKGPQGALYGRNAAAGAIVIQTLKPGDILEGGVKLSAA
EDNTYKASGYISTPIGDSAGLVLSASYNTSDGFYRNSFLDNRKVVDDQETWSVDGRFIAE
LGDSTEIDVKARYADLSGASINFNTAFHLPNFAGVDPAFFEDVNDHEYGYYSNIRPTNDQ
TTFETSVKLTHEFDTMTLTAWALYSDVDQALTADGTSADFARYTFPGATPASVAASNACF
TSTAQLTGFPLNAPTFIGNNPIPFIFDPVNGSTLGAYSPTTCDGTQYQIREQTDISAEVR
LASNGDGPLAWQIGAYYLNIDRDVGISLGADLGQGIIRELYNDADSSNPTSQLFSDNFNT
NVYAAFGSLDYQVADNFDVSLALRYDIEQREVSSRVPLVTDPITGGPINPGQAFGAIPDQ
KETFKELQPKLSLRYGLTDDLNFYANWGIGFKSGGFNNQGSAAIVDQNFNQFLGTNVLIN
DIYRKETSSAFEAGFKGSAANGAITFDLAGYYTKVDDMQFFEFFVGSFGLLRVVSNIDKV
DIYGVEFNANAEIVEGWDIFGSVNLTESEIKANASRPYTVGNKSPHTADYTINLGTQMVA
PIADSFDLVMRADYRITGPTWFHTVQEDTGPTLFSGLLPGSALALPAFVGDADMSITERD
AFGVLDLRFGLEGENWNITAFADNLLDKRYLNEVITAVEFGGSFVSPGGLRRFGVEVGYK
F
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcgcatcaaaacagctctttcactttcagccggtttcgccgcgctggtaagcttc
aatccggctctcgcccaaaccggcggcgaacaggatgccagcgaaggccaggacagcaat
gtcatcatcgtcacggcacggcgccaggacgaactgctcgccgaggtgccggcatcggtc
acggtgttcaccgccgacatgcttgaccgtaccggcgtccagcaggccgatgaatttgtc
cagctgaccgccggcgtgacgattgtcagcggcaccgcggaagcgggtgatacccagatc
aacattcgcggcatcaacggcgcgcgcgacgcggaaagctcggtcgcattggtggtcgac
ggcattctcaagaccaataccgcgcagctcaaccaggatcagggcacgctgcgccagatc
gagattttgaaaggcccgcagggcgcgctttatggccgcaatgctgccgccggcgcgatc
gtcatccagacgctcaagcccggtgatatattggaaggcggcgtcaagctcagcgctgca
gaagacaatacatataaggcctcgggctatatctcgacaccgattggcgacagcgccggt
ctggtgctgtcggcgtcctacaacaccagcgacggcttctaccgcaacagcttcctcgac
aaccgcaaggtggtcgatgatcaggaaacctggtcggtggatggccggttcatcgccgaa
ctgggcgattcaaccgaaatcgatgtgaaggcgcgctatgccgatctttcgggcgcctcg
atcaatttcaacacggccttccatctgcccaatttcgcgggtgtcgatccggcctttttc
gaagatgtgaacgatcacgaatatggctattattccaatatccgtccgaccaacgaccag
accaccttcgaaacatcggtcaagctgacgcatgaatttgacacgatgacgctgaccgca
tgggcgctctacagcgacgtcgaccaggcgttgacggccgacggcacgtcggcggatttt
gcgcgctatacattccccggtgcaacgcccgcgtcggtggcggcgtcgaacgcctgtttc
accagcacggcgcaactgaccggctttccgctcaacgcgccgaccttcatcggcaacaat
ccgatcccgttcatctttgatccggtcaatggatcaacgctcggtgcctatagcccaacc
acctgcgacggcacccaatatcagattcgcgaacagacggacatcagcgcggaagtccgg
ctggcgtccaatggcgacgggccgctggcctggcagatcggagcctattatctgaacatc
gaccgcgacgtcggaatcagcctcggtgccgatctcggtcagggtatcatccgcgaattg
tacaatgacgcggacagcagcaacccgacctcgcagctgttttccgacaatttcaacacc
aatgtctatgccgctttcggctcgctcgactatcaggtcgccgacaatttcgatgtcagt
ctggccctgcgctacgatatcgaacagcgggaagtctccagccgggtgccgctggtaacc
gatccgatcaccggcggtccgatcaaccccggccaggctttcggcgcgatccccgaccag
aaggaaaccttcaaggagctgcagccgaaactttcgctgcgctacggtctgaccgacgat
ctgaacttctacgccaactggggcatcggcttcaaatcgggcggattcaacaatcaggga
tccgccgccattgtcgaccagaatttcaaccagttcctcggcaccaacgtcctgatcaac
gatatctaccgcaaggaaacctcgagcgcgttcgaggccgggttcaagggctcggcggcc
aatggcgcgataaccttcgatcttgccggctattataccaaggtcgacgacatgcagttc
ttcgaatttttcgtcggatccttcggcctgctccgggtggtctcgaatatcgacaaggtt
gacatctacggggtggaattcaacgccaatgcggaaattgtcgagggctgggatattttc
ggttcggtcaatctcaccgaaagcgagatcaaggccaatgcttcccgcccctatacggtg
ggcaacaagtccccgcacaccgcggactatacgatcaacctcggcacccagatggttgca
ccgattgccgatagttttgacctggtaatgcgcgcagactatcgcatcaccggcccgacc
tggttccacacggtgcaggaagacaccggcccgaccctgttcagcggtctgttgcccggc
tctgccctggcgctgcccgccttcgtcggtgacgcggacatgtcgatcaccgagcgcgat
gcctttggcgtactcgatctgcgtttcggcctggaaggcgaaaactggaacatcaccgcc
tttgccgacaatctgctcgacaagcgctatctcaacgaggtgatcaccgcggtcgaattt
ggcgggtcctttgtgtcgcccggcggcctgcgccgcttcggtgtcgaggtcggctataaa
ttctga
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