Sphingorhabdus sp. YGSMI21: CHN51_05690
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Entry
CHN51_05690 CDS
T05308
Name
(GenBank) phenylalanine--tRNA ligase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
sphy
Sphingorhabdus sp. YGSMI21
Pathway
sphy00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sphy00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CHN51_05690
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sphy01007
]
CHN51_05690
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sphy03016
]
CHN51_05690
Enzymes [BR:
sphy01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
CHN51_05690
Amino acid related enzymes [BR:
sphy01007
]
Aminoacyl-tRNA synthetase
Class II (U)
CHN51_05690
Transfer RNA biogenesis [BR:
sphy03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
CHN51_05690
Prokaryotic type
CHN51_05690
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
tRNA_bind
B5
Motif
Other DBs
NCBI-ProteinID:
ATW03089
UniProt:
A0A2D3RCW0
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All DBs
Position
complement(1171962..1174334)
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AA seq
790 aa
AA seq
DB search
MKFSLSWLKSHLETDASLTEITEKLTDIGLEVEGVENPADALRPFRVAKVIEAGPHPNAD
KLQLLKVDDGAAEPWQVVCGAPNARAGMIGVFGPPGTYIPGSDFTLKPAKIRDVESFGMM
CSARELELGEDHDGIIELPESAASKVGTSYADYAKLDDPVIDVAITPNRQDCMGVRGIAR
DLAAAGLGTLKPMDIANIARNGTGPDIAIEDPEGCPAFYGCTVSGVTNGASPDWMQARLK
SAGQKPISALVDITNYVTLDQGRPLHVYDVAKLNGGLVARKAQDGEKLVALNDKEYLLDE
TMTVIADQAGAHGIGGIMGGAANGTDENTKDVLIECAYFDPAHIARTGQKLMLTSDARQR
FERGVDPAFLEEGIEIATALVQSLCGGSASAVTRVGEAPTEQRVIDYHPRQCAALGGLDV
DPDRQHGILEALGFVIGDNWQITVPTWRRDVTGWQDIVEEVIRIEGLDKVPSTPLPRKPG
VAKPTASPEQLAERKARRAAAARGLNEVVNWSFISEKEAAPFGGGSWSLANPISEDLKVM
RPSLLPGLIAAAQRNAARGATSIRLFEVGRRYLESSEHPTIGLVLAGENRARSWQAGAAS
KFDAYDAKAEVLAILDAARAPTDKLMDFGEAGDHYHPGQSGTLRLGPKKILAAYGVLHPS
TTKAMGFKGSAVAAEIFLDAIPLKKKSGHMRDAFAPPALQAVTRDFAFIVDADLPAGDLV
RAVKGADKKLITDVRIFDLFEGPSVGEGKKSLAVEVTLQPQDATLTEEDLKALSDKVVAS
AAKLGAELRG
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgaaattttccctgagctggctcaagtcgcatctcgaaaccgatgcaagcctcaccgaa
attaccgagaagctgaccgatatcggccttgaagtggaaggggttgaaaaccccgccgat
gccctgcgcccattccgtgttgccaaagtcatcgaagccgggccgcatccgaatgctgac
aagttgcaattgttgaaagttgacgatggtgcggcggaaccgtggcaggtggtgtgcggt
gcgccgaatgccagggcggggatgatcggtgtattcgggcctccgggaacctatattccg
ggtagcgatttcacgctgaaacccgcaaaaatccgggatgtcgagagcttcggcatgatg
tgcagcgcgcgcgagctggaactgggcgaagatcatgacgggatcatcgaactgccggaa
agtgcggccagtaaagttggcaccagttacgccgactatgccaagctcgatgatccggtc
atcgacgtcgcgatcacgcccaaccgtcaggattgcatgggcgtgcgcggcatagcgcgc
gatctcgccgccgccggcctcggcacgctgaagccaatggacatcgccaacatcgcccgc
aatggcaccggtccggatatcgcgattgaggatccggaaggctgtcccgccttttacggc
tgcaccgtcagcggcgtgaccaatggcgcgtctccggactggatgcaggcgcggctgaaa
tctgccggccagaaaccgatttcggcgctggtcgatatcaccaattatgtgacgctcgat
cagggccgcccgctgcacgtctatgacgtggccaagctcaacggcggtctggttgcgcgc
aaggcgcaggacggtgaaaagctggtcgcgctcaacgacaaggaatatctactcgacgag
accatgaccgtgatcgccgaccaggcgggcgcgcatggtatcggcggcatcatgggtggg
gccgccaatggcaccgacgagaataccaaagatgtactaatcgaatgcgcctatttcgat
ccggcccatatcgcccgcaccggccagaagctaatgctgaccagcgatgcgcggcagcgg
ttcgagcgcggcgttgatccggctttcctggaagaaggcatagaaatcgcaacggccctc
gtccagtcgctttgcggcggcagtgccagcgcggtcacccgcgtcggcgaagcaccgaca
gagcagcgcgtgatcgattatcacccgcgccaatgcgccgccctgggcgggctggatgtc
gatccggatcgacagcacggcattttggaagcgctgggctttgtcatcggtgataattgg
cagatcactgtgccgacatggcgtcgtgacgtcaccggctggcaggatatcgtcgaggaa
gtgatccggatagagggactggacaaggttccatcgacaccgcttccccgcaagccgggt
gtcgccaagcccaccgcctctccggaacagctggccgagcgcaaggcacggcgggccgcg
gcagcgcgcggtctcaacgaagtcgtcaactggagcttcatttccgagaaggaagcggcg
cctttcggtggcggaagctggtcactggccaatccgatcagcgaagacctgaaggtgatg
cgcccatccctgctgcccggcctgatcgcggccgcccagcgcaacgcagcgcgcggcgca
acgtcgatccgcctgttcgaagtcggccgccgctatctggaaagcagcgagcatccgacc
atcggcctggttctggccggcgaaaaccgcgcccgcagctggcaggccggcgccgcaagt
aaatttgatgcctatgatgccaaagccgaggtgttggcgatattggacgccgctcgtgca
ccgaccgacaagctgatggatttcggcgaagcgggcgatcattatcatcccggccagtcc
ggtaccttgcggctgggaccgaagaagattttggcggcttacggtgtgcttcacccgtca
acgaccaaggcgatgggtttcaaaggctctgccgttgccgccgagattttcctcgatgcg
attccgctgaagaaaaaatccggccacatgcgcgacgcttttgcgccaccggcgttgcag
gcggtgacccgcgatttcgccttcatcgtcgatgcggatctgccagcgggcgatctcgtg
cgcgcagtcaagggcgcggacaagaaactgattaccgatgtccggattttcgacctgttc
gagggaccgagcgtcggcgagggcaagaaatcgctggcggtggaagtgaccttgcaaccg
caagatgcgacattgaccgaagaggatttgaaggcgctctcggacaaggttgtggccagt
gcggcaaaattgggcgctgaattgagaggatag
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