Sphingorhabdus sp. YGSMI21: CHN51_06265
Help
Entry
CHN51_06265 CDS
T05308
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
sphy
Sphingorhabdus sp. YGSMI21
Pathway
sphy00300
Lysine biosynthesis
sphy01100
Metabolic pathways
sphy01120
Microbial metabolism in diverse environments
sphy01230
Biosynthesis of amino acids
Module
sphy_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sphy00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CHN51_06265
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sphy01002
]
CHN51_06265
Enzymes [BR:
sphy01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
CHN51_06265
Peptidases and inhibitors [BR:
sphy01002
]
Metallo peptidases
Family M20
CHN51_06265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Motif
Other DBs
NCBI-ProteinID:
ATW03191
UniProt:
A0A2D3RBX1
LinkDB
All DBs
Position
complement(1284490..1285617)
Genome browser
AA seq
375 aa
AA seq
DB search
MTAPTALELAKRLIAQPSITPATGSVFDEMEAMLKPLGFEVHRFVAGEAPDGPVENLFAI
RKGTSGSRHVAYAGHLDVVPPGQGWQTDPFVPEIRSDLLYGRGAVDMKGSIAAFVRALHQ
LPDDLGTISLIITGDEEGPARYGTVALMEYMAERGIVPDLCLVGEPTSVHRLGDMMKIGR
RGSVNMWVTVNGTQGHVAYPQNADNPITKLGKILSEIDSLQLDEGTDWFQPSNIEFTDLH
VGNPAHNVIPAKAEGRLSIRFNDRHSGESLSAMIREIVERHGGELKPVISGEPFLTPPGD
FSDLLRDAISGATGIQPELSTSGGTSDARFLSKICPVIEFGLCNATMHKLDEAVAIDDLA
TLADIYEHFVLLATA
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcaccaaccgctctcgaactggccaaacggctgattgcgcagcccagcatcacg
cccgccaccggcagcgtgtttgacgaaatggaggcaatgctgaagcctctgggatttgag
gtgcaccgctttgttgccggtgaagcgcccgacggtccggtcgaaaatctgttcgccatt
cgcaagggcacatccggatcccggcatgtggcctatgccgggcatctggacgtcgtgcca
cccggccagggctggcagaccgatccttttgttccggagatacgcagcgatctcctttac
ggccggggtgcggtggacatgaaaggcagcatcgccgccttcgtccgcgcgcttcaccag
ttgcccgacgatctgggcacgatcagcctgatcatcaccggtgacgaggaaggaccggcg
cgctacggaacggtggcgctgatggaatatatggccgagcgcggcatcgtgcccgatctg
tgcctcgtcggcgagccgacgtccgtccaccggctcggcgacatgatgaagatcggccgc
cgcggatcggtcaatatgtgggtgaccgtcaacggcacgcagggccatgtagcctatccg
caaaatgccgacaatccgatcaccaagctgggaaagattctcagcgagatagattcgctg
caactggatgaaggcaccgactggtttcagccgagcaatatcgaatttaccgatctgcac
gtcggcaatcccgcccataatgtcattcccgccaaggccgagggccggctgtcgatccgg
ttcaacgaccgccacagtggcgagagcctgagtgcgatgatccgcgagattgtcgagcgg
cacggaggcgagctgaaaccggtgatttccggcgagccttttctgacaccgccgggcgac
ttttccgatctattgcgtgatgcgataagcggcgccaccgggatccagccggaactgagc
accagcggcggcacatccgatgcgcgtttcctgtcaaaaatctgtccggtgatcgagttc
ggtctctgtaacgccaccatgcacaagctggacgaggccgtcgccatcgatgatctcgcc
acattggcggatatttacgagcatttcgttttgctcgccaccgcctga
DBGET
integrated database retrieval system
