Sphingorhabdus sp. YGSMI21: CHN51_08275
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Entry
CHN51_08275 CDS
T05308
Name
(GenBank) LacI family transcriptional regulator
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
sphy
Sphingorhabdus sp. YGSMI21
Brite
KEGG Orthology (KO) [BR:
sphy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sphy03000
]
CHN51_08275
Transcription factors [BR:
sphy03000
]
Prokaryotic type
Helix-turn-helix
LacI family
CHN51_08275
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
LacI
Peripla_BP_1
Peripla_BP_4
HTH_Tnp_ISL3
HTH_17
HTH_3
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
ATW03530
UniProt:
A0A2D3RCU3
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Position
complement(1706280..1707332)
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AA seq
350 aa
AA seq
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MPTRANRPKTKQPTINDVAALAGVSKKTVSRVINESPLISEKTREKVKTVIAELGFVPNP
QARALAFRRNFLIVLLHDNPNAQTVLNFQNGVLDAIKDSDLALLVRPVDRDSDDMLENVR
VFLEKQRPIGALLLPPISENDDLTELCQSLGVRYVRIGSAELDEPGKCISSNDREVVEKA
CRKLIELGHRRIGFVRGPQGFRSARERELGFQDALRGAGLTMSEELIAQGNYRIDSGTEA
GHKLLSLKDRPTAIFASNDEMAAGVMQVALGNGISVPEQLSIIGFDDSPTATHIWPRLST
VRWPIREMGAHAAHMLVSEFLPPVPGISEPEYAMLASTFVERQSVAAPEK
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgcccacaagagcaaatcgtccgaagacaaaacagccaacgatcaacgatgttgcggcc
ctggcgggcgtatcgaaaaagacggtcagccgcgttatcaacgagtcacccctgatcagc
gagaagaccagagagaaggtcaaaacggtgatcgcggaactgggcttcgtgccaaatccg
caggcgcgggcgctcgcctttcgacggaattttctcatcgtgttgctgcatgacaatccg
aatgcccagacggtcctcaatttccagaatggcgtgctcgatgcgatcaaggatagtgat
ctcgcgcttctcgtccgtcccgtggatcgcgattccgacgatatgctggaaaatgtgagg
gtattcctggagaaacagcggccgattggcgcgcttctcctgccaccaatttccgaaaat
gatgatctgaccgaattgtgccagtcgctgggtgtccgttatgtccggatcggctctgcc
gagcttgacgaaccaggaaaatgcatatcgtcaaatgacagagaagtcgtcgaaaaggcc
tgtcgcaagctgattgaactcggacaccggcgcatcggttttgtaagaggtccccagggc
tttcgatccgcacgggagcgcgagctgggatttcaagatgccctgcgtggcgctggactg
acgatgtccgaagaactcatagctcagggcaattaccggatagattccggaaccgaggcg
ggacataaattattgtcactgaaggaccggccgaccgcaatatttgccagtaacgacgaa
atggccgcgggcgtgatgcaagtcgcgctaggcaacgggatttccgtccccgaacaattg
tcgattatcggctttgatgattccccgacggccacccatatctggccccgcctcagcacg
gtgcgctggccgatacgcgaaatgggcgcgcacgcggcgcacatgctcgtctccgaattt
ctgccgcccgtaccgggtatcagtgaacccgaatatgccatgcttgcgtctacatttgtc
gagcggcagtcggtggcggctccggagaaatag
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