Sphingorhabdus sp. YGSMI21: CHN51_08905
Help
Entry
CHN51_08905 CDS
T05308
Name
(GenBank) hypothetical protein
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
sphy
Sphingorhabdus sp. YGSMI21
Pathway
sphy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sphy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CHN51_08905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sphy03019
]
CHN51_08905
Enzymes [BR:
sphy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
CHN51_08905
Messenger RNA biogenesis [BR:
sphy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CHN51_08905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
tRNA_NucTran2_2
Motif
Other DBs
NCBI-ProteinID:
ATW03641
LinkDB
All DBs
Position
complement(1824142..1825368)
Genome browser
AA seq
408 aa
AA seq
DB search
MTRTIPPAEWTQRPGLAELIAALDGKARFVGGAVRDTLLGLSVKDIDVATPLLPEDVMER
LAAVSVKTVPTGIAHGTVTAVLPDGPVEITTLRRDVSTDGRRATVAFSDDWKEDAARRDF
TINALSADPGTLEVFDYFGGLDDLENLHIRFIGSAAERIAEDHLRIMRYFRFLARFGQHQ
VDSEAFAACTAAAAKLETLSRERVADELLKLLATGDPRFAVSQMLDAGIFRHIFEPLDSN
AGDMVDRLVEREQRHHVEPLAIRRLVALLPKEADKASHIAKGLKLSKKQQRAIGERLLAA
QGGQAGGPETGLADIRGFAYRTSVDSARDAALLFADDTALPKLLDALDGWQPPVFPLTGG
DLIAQGLKPGPLVAKTLAKIETAWIAQGFPDEAWIRKFIKEQALTRLP
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
gtgacgaggacaataccgccggcagagtggacacaaaggcccggtctcgcggaattgatc
gccgcgctggatggcaaggcgcgctttgtcggcggcgccgtgcgcgacacgttgctgggc
ctgtcggtcaaggatatcgatgtcgccaccccgctgctgccggaggatgtgatggaacgg
cttgcggccgtgtccgttaaaaccgttcccaccggcatagcccatggcactgtcaccgcc
gtgctgcccgatggccccgtcgaaatcaccacgctgcggcgcgatgtctcaaccgatggc
cggcgggcaaccgtagccttcagcgatgactggaaagaggatgcggcgcgccgggatttc
acgatcaacgccctgtccgccgatcccggcacgctggaagtgttcgactatttcggcggt
ctggacgatctggaaaatctgcacatccgcttcatcggttcggccgccgaacggatcgcg
gaagaccatttgcggatcatgcgctatttccgctttctcgcgcgcttcggccagcatcag
gtcgatagcgaggcctttgcagcctgcaccgctgcggcagcgaagcttgagacgctttcc
cgcgagcgggtggcggacgagttgttgaaactactcgccaccggagacccgcgatttgcc
gtcagccagatgctggacgccgggattttccggcatattttcgagcccctcgattcaaac
gccggggacatggtcgatcgtctggtcgagcgcgagcaacggcatcatgtcgagcccctt
gcgatccggcggctggtggcgctgctgcccaaggaggcggacaaggcgagccatattgcc
aagggcctgaaactgtcgaagaaacagcagagagcgatcggcgaacggcttctggccgcg
caaggaggccaggccggtggccccgaaacgggtctcgccgatattcgcggcttcgcttat
cgcaccagtgtggacagcgcccgcgatgccgcactcctgttcgccgacgacaccgctttg
cctaaacttctggatgcactcgacgggtggcaaccgccggtctttccgctgaccggtggc
gacctgatcgcccaaggattgaagccgggaccgctcgttgcgaaaaccctcgccaaaatc
gagacagcctggatcgcgcaggggtttccagacgaagcatggatccggaaattcatcaag
gaacaggccttgacgcgcctgccctga
DBGET
integrated database retrieval system
