Sphingorhabdus sp. YGSMI21: CHN51_09115
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Entry
CHN51_09115 CDS
T05308
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sphy
Sphingorhabdus sp. YGSMI21
Brite
KEGG Orthology (KO) [BR:
sphy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sphy02000
]
CHN51_09115
Transporters [BR:
sphy02000
]
Other transporters
Pores ion channels [TC:
1
]
CHN51_09115
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
4PPT_N
Motif
Other DBs
NCBI-ProteinID:
ATW05464
LinkDB
All DBs
Position
1862348..1865329
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AA seq
993 aa
AA seq
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MAAASLYALGSAGTAMAQDAPAPAPEAEAAETDENIIIVSGFRASLENALVAKRDSNLII
ESVTAEDIGKFPDQNIAESLQRLPGVQIDRENGQGTKVRIRGLDQNLTLLNGDLFVSGQE
TFKVGEGNFVRNDSLEGVPSELIGGVEVFKSPNASLIEGGLGGIVNLKTRSALDMKDGFT
IAGNARLNKGTEISGWEPTGALIAGYNFNDQLGIIASFSYDKTNDHHNVLGGENRGNWAF
AAGRRDTATTPTNYYAPEYRYITDRDQYRRRWGASLGLNYRPTDELELSATYIHSDLKVD
TREASAKFPFGQGELLQLSSDAVIDSDGVLQSGTVQANSAEVISLVDVTNIKSDNLQFGI
DWDNGSNFRASIAANYSTADLNREVANADVRYTQYGIRQTDPGGALIDGVPGNPAAPATW
DFTYDNGKFPVFGFGAGTADDLFTNPANGYFKSHWAFGDRSKVDGHSIKADFAYDVDNSD
DNTITLSAGFRYGQRTVEFGSGRYLADLSGKGELDATAIPESEREDNFQYNWTPYGYFQD
GAIGFKICDLPEANKPAAFAGCSRFGNSPAVNTPFQSFLSNPERVETIKNFAGGGNIPGD
SISVQDRSQMTDALGWLQALYPDTPISYFEDPLQAYLVKEETKSGYIMADMGGADDPYHI
NVGLRVVNTRLRVDQNQPSNADPSYWGTDSWNGVLRDFQTDTIVRSTTDFLPSINAVVDI
ADDKKLRFSAARVVARQALDDLGRGFSTQFTRDSTVGSPTENLFLFTNGSRGNAELEPFR
AYQFDLAYEMYFGRQGLLSVGAFWKEVDSFIVTETVPIFVNDQSGGRLGPVSQPANGTGG
RVRGFEVAGQYAFDFGLGFTANYTFSDTKTDGFNDFDSNLALPGVSKHSFNSQIYFERDG
FAARASYTWRSKQYVGNFGFGDGGVTRTLGIYQRSYGQLDGQISYDFNENFGVLVEGINL
TKADQSAYLQFPELPFRYESGSRRIYVGGKFKF
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgcttccctatatgcattgggaagcgccggcactgccatggcccaggatgct
cccgctccggctccggaagcggaagccgccgagacggatgagaatatcatcatcgtcagc
ggtttccgggcttcgctggaaaacgcgctggtcgccaaacgcgactcaaacctgatcatt
gaatcggtgacggcggaagatatcggcaaattcccggaccagaatatcgccgagtcgctg
caacgccttcccggtgtccagatcgaccgcgaaaatggccagggcacgaaggtccgtatc
cgcggcctcgatcagaacctgacgctccttaatggcgacctgtttgtcagtggccaggaa
accttcaaggtcggcgagggcaatttcgtccgcaatgactcgctggaaggcgtgccatcg
gaactgatcggtggcgttgaagtgttcaagtcacccaacgcctcccttatcgaaggcggt
cttggcggtatcgtcaatctgaagacacgcagcgcgctggacatgaaagacgggttcacc
atcgccggcaacgcccgtttgaacaagggcacggaaatcagcggatgggaaccgaccgga
gcgctgatcgcgggttataatttcaatgaccagctgggtatcatcgcctcgttcagctat
gacaagaccaacgaccatcacaatgtgctcggcggggaaaatcgcggcaactgggccttt
gctgccggtcgccgggacacggcaaccacgccgaccaactattatgctccggaatatcgc
tatataaccgatcgcgatcaatatcgccggcgctggggtgcttcgcttggcctcaactat
cgcccgaccgacgagttggagcttagcgcaacctatatccactccgatctgaaagtggac
acccgcgaggcctcggccaaattcccgttcggtcagggggaattgctgcaactcagctct
gacgccgtaatcgactccgacggcgtcttgcagagcggcaccgtgcaggcgaattcggcc
gaggttatctcgctggttgatgttacgaatatcaagtcggacaatctgcagttcggcatc
gactgggacaatggcagcaatttccgcgccagtatcgcagccaattattccaccgcagac
ctcaatcgcgaagtggccaatgccgatgtgcgctacacccaatatggcattcgccagact
gatccgggcggcgccctgatcgacggggtgcccggcaatccggctgccccggcgacctgg
gatttcacctatgacaatggcaagttcccggtcttcggcttcggcgccggaaccgccgac
gatctgttcaccaatccggccaacggctatttcaagtcgcactgggcctttggcgaccgg
tccaaggtggacggccattcgatcaaggctgatttcgcctatgatgtggacaatagcgat
gacaacacgatcacgctgagcgcaggcttccgttatggccagcgcaccgtcgagttcggt
tcaggacgctatctggcggacttgtccggcaaaggtgaactggatgcgacggcgattccg
gaatccgagcgtgaagacaatttccagtataactggacgccttatggttatttccaggac
ggtgcgatcggtttcaaaatctgtgatttgccagaggccaacaagcctgcagccttcgcc
ggttgctcccgctttggtaactcgcctgctgtcaacacgccgttccagtcctttttgtcc
aatccggaacgggttgagacgatcaagaattttgctggtggcggcaatattccgggcgac
agtatctcggttcaggaccggtcgcagatgaccgatgctctcggctggctgcaagcgcta
tatccggatacgccgatcagctatttcgaggatccgctgcaggcctatctggtcaaggaa
gaaacgaagtccggctatatcatggcggatatgggcggagcggacgatccctatcatatc
aatgtcggtctgcgggtcgtgaacaccagattgcgggtcgaccagaaccagccatccaat
gccgatcccagctattggggtaccgacagctggaacggcgttttgcgcgacttccagacc
gatacgattgtccgcagcacgaccgatttcctgccgagcatcaacgcggtggtcgacatt
gccgatgacaagaagctccgtttctccgccgcgcgcgtggttgcacgtcaagcgctcgat
gacctgggtcgcggattctctacgcagtttaccagagattccactgttggatcgccgacc
gagaacttgtttctgtttaccaacgggtcacggggcaatgccgagctggagccgttccgc
gcctatcagttcgatctggcctatgaaatgtactttggtcggcaaggcctgctttcggtt
ggtgccttctggaaagaagtcgactccttcatcgtcacggagaccgttccgattttcgtg
aacgatcagtcgggcggtcgattggggccggttagccagccagccaacggcaccggcggc
cgggtccggggtttcgaggttgccggtcaatatgcctttgacttcggtctgggcttcacc
gccaactatacattctcggatacaaaaaccgatggcttcaacgattttgacagcaatctg
gccttgccgggtgtgtcgaaacattcgttcaacagtcagatctatttcgaaagagatggt
tttgctgcgcgggcttcctacacgtggcggtcgaagcaatatgtcggaaacttcggcttt
ggcgatggtggggtgacgcgcacattgggtatctaccagcggtcctatggccagctggat
ggacagatttcctatgacttcaacgagaatttcggcgtgcttgtcgaaggtatcaacctg
acgaaggcagaccagtccgcctatctgcagttcccggaattgccattccgctatgaatcg
ggatcgcgcagaatttacgtcggcggcaaattcaagttctag
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