Sphingorhabdus sp. YGSMI21: CHN51_09370
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Entry
CHN51_09370 CDS
T05308
Name
(GenBank) RNA polymerase subunit sigma
KO
K24073
RNA polymerase sigma factor CnrH
Organism
sphy
Sphingorhabdus sp. YGSMI21
Brite
KEGG Orthology (KO) [BR:
sphy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sphy03021
]
CHN51_09370
Transcription machinery [BR:
sphy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CHN51_09370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
DUF5039
PhyR_sigma-like
Sigma70_ECF
DUF134
HTH_28
Xre-like-HTH
Motif
Other DBs
NCBI-ProteinID:
ATW05470
UniProt:
A0A2D3RIC9
LinkDB
All DBs
Position
1913537..1914025
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AA seq
162 aa
AA seq
DB search
MNQQAPRLQNIALRMMGNSSDAEDAVQEALAAAWFKLASFDLSRPISPWLTRITVNKCRD
LLRKRRIRQFFEFHSDNEAGMIVADDAPDPSAELQARQALEVMQKEITRLPATLREPFVL
VTFGENSQAEAAHILGISEKAVETRIYRARNRLREISEKFEG
NT seq
489 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagcaagcgccccggctgcaaaatatcgccctgagaatgatgggcaacagttca
gatgccgaagatgccgttcaggaggcgctggcagctgcttggttcaagctcgccagcttt
gatttgtcgcgacccatttctccgtggctcacccggattacagtcaataaatgccgcgat
cttttgcgtaaacgtcggatcaggcagttttttgaatttcacagcgacaatgaagctggc
atgatagtagctgacgatgcacctgacccaagtgcagaattgcaggcgcgtcaggcgctt
gaagtcatgcaaaaagagatcactcgcttgccagcgacattgcgtgagccgtttgttctg
gtcacttttggcgagaatagccaagccgaggcggcgcatattctcggaatatctgagaaa
gccgtcgaaacgcgaatttaccgtgcccgcaatcgcctgcgagaaatttctgaaaaattt
gaggggtga
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