Sphingorhabdus sp. YGSMI21: CHN51_10915
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Entry
CHN51_10915 CDS
T05308
Name
(GenBank) AAA family ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
sphy
Sphingorhabdus sp. YGSMI21
Pathway
sphy04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sphy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
CHN51_10915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sphy03019
]
CHN51_10915
03009 Ribosome biogenesis [BR:
sphy03009
]
CHN51_10915
04131 Membrane trafficking [BR:
sphy04131
]
CHN51_10915
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sphy04147
]
CHN51_10915
Messenger RNA biogenesis [BR:
sphy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
CHN51_10915
Ribosome biogenesis [BR:
sphy03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
CHN51_10915
Membrane trafficking [BR:
sphy04131
]
SNARE
SNARE associated proteins
Others
CHN51_10915
Autophagy
Aggrephagy
Other aggrephagy associated proteins
CHN51_10915
Exosome [BR:
sphy04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
CHN51_10915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
AAA_22
AAA_5
AAA_33
AAA_2
CDC48_2
AAA_14
TIP49
IstB_IS21
AAA_28
nSTAND3
RNA_helicase
NPHP3_N
AAA_18
AAA_7
Mg_chelatase
Sigma54_activat
AAA_30
ABC_tran
DUF815
AAA_11
AAA_19
Zeta_toxin
AAA_3
AAA_24
Sigma54_activ_2
Vps4_C
AAA_17
TsaE
AAA_lid_PRS2_C
AAA_25
Parvo_NS1
ATPase
NB-ARC
Viral_helicase1
SLFN-g3_helicase
PhoH
Motif
Other DBs
NCBI-ProteinID:
ATW05508
UniProt:
A0A2D3RIE8
LinkDB
All DBs
Position
2228400..2230682
Genome browser
AA seq
760 aa
AA seq
DB search
MRLKLQVANARPEDSGRGLARLSRDNLGKLGLIEGDVVEIVGKQATPARAVLPYPEDEGL
DFVRLDGLQRANAGVGAGDFVEIRKVESKPAKKVVFGPAQKDLRLQGNGGGLKRSFMGRP
LKAGDFVATHGQQQVDRGDMPPQLRQMLAAPAFSLTQIRLNVIATTPKGIVHIDEETEVE
LRPEYEESTEHRRADVTYDDIGGLHETIDQLREMVELPLRYPQLFTRLGVDPPRGVLLHG
PPGTGKTRLARAVANESEAEFFLINGPEIMGSAYGESEKKLREIFEAATKAAPSILFIDE
IDSIAPKRGQVQGETEKRLVAQLLTLMDGLESRLNLVVIAATNRPEAIDEALRRPGRFDR
EIIVGVPDVAGRREILGIHTRGMPLDKTVDLKELARTTYGFVGADLAALTREAAIEAVRR
IMPKLDLESENVPPEVLEELVVYRQDFIEALKRVQPSAMREVMVQAPDVRWEDIGGLDEA
QMRLKEGIELPMKNPEAFIRLGIRPAKGFLLYGPPGTGKTLLAKAVAREAEANFIATKSS
DLLSKWYGESEQQIARLFARARQVAPTILFIDEIDSLVPARGGGMGEPQVTERVVNTILA
EMDGLEEMQSVILIGATNRPGLVDPALLRPGRFDELIYVPVPGKAGRRRILAIHTAKMPL
GKDVDLDDMAERTDRYSGADLEDLVRRAGLYALREFGGLVETVQMKHFEKALEDSRASVT
QEMEEEYSKMESQLKQNAMRAEPIGFVSPGMLTPVKDSKH
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgaaattgcaggttgccaatgcccggccggaggacagcggtcgcggactggcc
cgtctgtcgcgcgacaatctcgggaaactcgggttgatcgagggcgatgtcgtcgagatt
gtcggcaaacaggcaaccccggcgcgggcggtccttccctatccggaagacgaagggctg
gattttgtccggctagacggtctgcagcgtgccaatgccggggtaggtgcgggcgacttt
gtcgaaattcgcaaggtcgaatcgaaaccggccaagaaggtcgttttcggcccggcgcaa
aaggacctgcgattgcagggcaatggcggtggtctgaagcgcagcttcatggggcgtccg
ctcaaggccggggattttgtcgcaacccatggccagcagcaggtcgatcgcggcgacatg
ccgccgcaattgcggcagatgctggcagcgccggctttttccctgacccagatacggctc
aatgtcatcgcgaccacgccaaaggggatcgtccatatcgacgaggaaaccgaagtggaa
ctgcggccggaatatgaggaatcgaccgagcatcgccgtgccgatgtaacttatgacgat
atcggcggcctgcacgaaacgattgaccagcttcgcgaaatggtcgaactgccgttgcgc
tatccgcaactcttcactcggctcggtgtcgacccgccacgcggcgtgttgctgcacggt
cctccggggaccggcaagacccggcttgcccgggcggtggccaatgaaagcgaagccgag
ttcttcctgatcaacggtccggaaatcatgggctcggcctatggcgaatcggaaaagaaa
ctgcgcgagatttttgaagcagcaaccaaggctgcgccttcgatcctgttcatcgacgag
atcgactcgatcgcgccaaaacgcggacaggtacagggcgaaaccgagaagcggctggtg
gcgcagctgctgaccctgatggacggtctcgaatcgcggctcaacctggtggtcatcgcg
gcgaccaaccggccggaggcgatcgacgaggcgctgcgccggcccggccgctttgaccgg
gaaatcatcgtcggcgttcctgatgtcgccggacggcgcgagatactcggcatccatacg
cgtggcatgccgctcgacaaaacggttgatctgaaggaacttgcacggacaacctatggt
tttgtcggagccgatcttgcggccctgacccgcgaggcggcaattgaagcggtgcgccgg
atcatgcccaagctcgatctggaatcggaaaatgtaccgccggaagtgctcgaggaactg
gtcgtctaccggcaggatttcatcgaagccctgaaacgggtccagccttccgcgatgcgc
gaagtcatggttcaggctccggatgtccgctgggaagacatcggcggcctcgacgaggcg
cagatgcggctcaaggaaggcatcgaactgccgatgaaaaatccggaagccttcatccgg
ctgggtatccgtccggccaagggctttctgctctacggtccgccaggcaccggcaagacc
ttgctggccaaggcggtcgcgcgcgaggcggaggccaatttcatcgccaccaaatcgagc
gacctgctgtccaaatggtatggcgagagcgagcaacagatcgcacgcttgttcgcgcgg
gcgaggcaagtcgcgccaaccatcctgttcatcgacgagattgacagtctggtgccagca
cgcggcggcggcatgggcgagccccaggtcaccgagcgggtggtcaacacgatcctcgcc
gagatggacggtctggaagaaatgcagtcggtaatattgatcggcgcgaccaaccgcccc
ggtctggtcgatccggctctgttgcgaccgggccgctttgacgagctgatctatgtcccg
gttccgggtaaggccggccgtcgccggatattggcgatccacactgcgaaaatgccgctc
ggcaaggatgtcgatctcgacgatatggccgaacgcacggaccgctattccggcgccgat
ctggaagatctggtccgccgggcagggctttacgccttgcgcgaatttggcgggctcgtc
gagaccgtccagatgaagcatttcgaaaaggcgctggaagacagccgggcttcggtcacg
caggaaatggaggaagaatattccaagatggaatcacagctgaagcagaatgcgatgcgg
gcagagccgatcggttttgtctcgccgggcatgctgacgccggtgaaggacagcaaacac
taa
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