Sphingorhabdus sp. YGSMI21: CHN51_11965
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Entry
CHN51_11965 CDS
T05308
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase
KO
K01929
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:
6.3.2.10
]
Organism
sphy
Sphingorhabdus sp. YGSMI21
Pathway
sphy00300
Lysine biosynthesis
sphy00550
Peptidoglycan biosynthesis
sphy01100
Metabolic pathways
sphy01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
sphy00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CHN51_11965
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CHN51_11965
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
CHN51_11965
Enzymes [BR:
sphy01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
CHN51_11965
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Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
DUF4165
Motif
Other DBs
NCBI-ProteinID:
ATW04161
UniProt:
A0A2D3REN8
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Position
2466349..2467746
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AA seq
465 aa
AA seq
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MTVLWTSAAIAEATGGKPSTDFSVSGVAFDSREIGPGDLFVALKGEHSDGHLHVDQAFAS
GAAGAIVSEPVDGPHVLVSDTVKALDALAIASRARTSAKIIGVTGSVGKTGTKEALFAAL
DRCSFGKAHRSVKSYNNHVGVPLSLSRMPEDTKYGIFEMGMNHAHELSALTRLVRPHAAI
ITAIAPAHIGNFSNGEAGIVDAKAEIFEGLMPGGTAIIPHDSPHCARLRKKAERHAEHVI
SFGFEAGADVRAIDMVPAPRGGSLVTAKLGEQSLCFTIAEAGRHWVSNSLAILAAVRAVG
GDLATAGLALAEMSGIDGRGRRHLVSLKSGGTATVIDESYNANPASMKATLQHFTGEPCT
GQKILILGAMGELGEQSARYHTALADDILLTGAKAIILVGEDMAHTAAKLEQGLDRDVKM
SHAASASDALAEVAKLLSDGDILLVKGSNYLGLSSAVSALVSGEY
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgactgtattatggacatccgccgcgatagcggaggccacgggcggcaagccaagcacc
gatttttcggtgagcggcgttgcttttgattcacgtgaaatcgggccgggcgatctgttc
gtggcgctcaagggagagcatagcgacggtcatctgcacgtcgaccaggctttcgcctct
ggagcggccggcgccattgtcagcgagccggtcgacggtccgcatgttttggtatccgac
accgttaaagcgctcgatgcgctggccattgcgtcacgagcccgtacctccgcaaaaatc
atcggggtgaccggatcggtcggaaagaccggcaccaaggaggctctatttgccgcgctt
gaccgctgttccttcggaaaggcgcaccgatcggtcaaaagctacaataatcatgtcggc
gtcccgctcagcctgtcgcggatgccggaagataccaaatatggcattttcgaaatgggt
atgaaccacgcccacgaactgtctgcgctcacccgtctggtacggccgcatgctgcaatc
attaccgccatcgcgccggcccatatcggcaatttttccaatggtgaagccggcatcgtt
gatgccaaggccgagatattcgagggcctgatgcccggcggcactgcgatcatcccgcat
gacagcccgcattgtgcgcggctgcggaaaaaggcggaacgtcacgcggaacatgtgatt
tccttcggctttgaggccggcgccgacgtccgcgcgatcgatatggtgcccgccccccgt
ggcggctcgctggtcacggcgaaactgggcgagcaaagtctctgcttcaccatcgccgaa
gcggggcggcactgggtatccaattccctggccattctcgcagcggtgcgcgcggtcggc
ggcgatctcgccaccgccggtctggcgctcgccgaaatgagcggcatcgacggtcgtggc
cggcggcatctcgtctcgctcaagtccggtggcacagcgacagttatcgacgagagctac
aatgccaatccggcatcgatgaaagcgaccttacaacattttaccggcgagccctgcacc
ggccagaaaatcctcatattgggcgcgatgggcgagctgggcgagcaatcggcccgctat
cacacggctctggccgacgatattctgctgaccggagccaaagccatcatattggtcggc
gaggatatggcacatactgccgcgaaactcgaacagggccttgatcgggacgtgaaaatg
tcacatgcggcaagtgcttcggacgcgctggccgaggtcgcaaaattgctcagcgacggg
gatatccttctggtcaagggttcaaattatctgggactttcctccgcggtttccgcgctg
gtgagcggggagtattga
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