Sphingorhabdus sp. YGSMI21: CHN51_12000
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Entry
CHN51_12000 CDS
T05308
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
sphy
Sphingorhabdus sp. YGSMI21
Pathway
sphy00470
D-Amino acid metabolism
sphy00550
Peptidoglycan biosynthesis
sphy01100
Metabolic pathways
sphy01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
sphy00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CHN51_12000
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CHN51_12000
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
CHN51_12000
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sphy01011
]
CHN51_12000
Enzymes [BR:
sphy01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
CHN51_12000
Peptidoglycan biosynthesis and degradation proteins [BR:
sphy01011
]
Precursor biosynthesis
Amino acid ligase
CHN51_12000
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
ATP-grasp_4
Motif
Other DBs
NCBI-ProteinID:
ATW04167
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All DBs
Position
2474954..2475886
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AA seq
310 aa
AA seq
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MTANNEKSLHVAVLMGGWSAEREVSLSSGNGVADALEKNGHQVSRVDMDRNVAQVLAALR
PDVVFNALHGVPGEDGSVQGMLDLMQIPYTHSGMVTSVIAIDKELTKQQLVPAGIPMPKG
RIVSSASLYEADPLPRPYVLKPVNEGSSVGVAIVTDDSNYGNPIGRDVDGPWQEFDELLA
EPFIKGRELTTAVLGDKALCVTELRTAQGFYDYAAKYTEGLTQHVCPAEIPADIEKLCLD
YALRAHQVLGCKGTSRTDFRWDDEQGAAGLFVLETNTQPGMTPLSLVPEQAKQMGISYEE
LVEIIVREAL
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgactgctaataatgaaaaaagtctccacgtcgctgtgcttatgggcggctggtctgct
gaacgcgaagtatcgctgagcagcggcaatggtgtggccgatgcgctggagaaaaacggc
catcaggtgagccgtgtcgacatggatcgcaatgttgcacaggtgctggccgctcttcgg
cctgatgtggtgttcaatgcgctgcacggcgtgccgggtgaagacggcagcgtccagggc
atgctcgacctgatgcagattccctatacccacagcggcatggtcacatcggtgatcgcg
atcgacaaggaattgaccaagcagcagctggttcccgccggtatcccgatgcccaagggc
cggattgtttccagtgccagcctgtatgaagccgatcccttgccgcggccctatgtcctg
aaaccggtcaacgaaggctcgtcggtcggcgtcgcaatcgtgaccgatgacagcaattac
ggcaatccgattggccgcgacgttgacgggccgtggcaggaatttgacgaactgctcgcc
gagcctttcatcaagggccgcgaactgaccaccgccgttctgggcgacaaggcgctttgc
gtgacagaactgagaaccgcgcagggtttctatgactatgctgccaaatataccgagggc
ctgacccagcatgtctgtcccgccgaaatccccgccgatatcgagaaattatgtctcgac
tatgccttgcgcgcccatcaagttctcggctgcaagggcacgtcgcgcaccgatttccgc
tgggatgacgaacagggtgcggccggtctgttcgtactggaaaccaatacccagccgggc
atgaccccgctcagtctggtccccgaacaggcaaagcagatggggatcagctatgaagag
ctggtcgagataatcgtgagagaagcgctatga
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