Sphingorhabdus sp. YGSMI21: CHN51_13415
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Entry
CHN51_13415 CDS
T05308
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
sphy
Sphingorhabdus sp. YGSMI21
Pathway
sphy00730
Thiamine metabolism
sphy01100
Metabolic pathways
sphy01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
sphy00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
CHN51_13415
Enzymes [BR:
sphy01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
CHN51_13415
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
ATW04419
UniProt:
A0A2D3RGJ8
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All DBs
Position
2793944..2795833
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AA seq
629 aa
AA seq
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MADLPAKTEIGVTTGPISGSKKVHVASHSGSGIRVAMREIYLEGGEAPVRVYDTSGPYTD
PEALIDIQTGLNELRSPWIKARGDVEEVTQREVKPEDNGQLGPDRSGGVAPFPNVRRKVL
RAKPGANVSQMHYARQGIITPEMEYVAERENLGRERLKEYKRDGESFGASIPDYVTPEFV
RDEIARGRAIIPNNINHPESEPMAIGRNFLVKINANIGNSAVASDVASEVDKMVWSIRWG
ADTVMDLSTGRNIHDTREWIIRNSPVPIGTVPIYQALEKVGGVAEDLTWEIFRDTLIEQA
EQGVDYFTIHAGVRLPYVPMAAKRVTGIVSRGGSIMAKWCLAHHKESFLYEHFDDITEIM
KAYDIAYSLGDGLRPGSIADANDEAQFSELYTLGELTHRAWKSDVQVMIEGPGHVPMHKI
KENMEKQLEVCGEAPFYTLGPLTTDIAPGYDHITSGIGAAQIGWYGTAMLCYVTPKEHLG
LPDRDDVKVGVVTYKLAAHAADLAKGHPAAQVRDDALSKARFEFRWRDQFNLSLDPETAM
QYHDQTLPAEGAKTAHFCSMCGPKFCSMKISQEVRDFASKQNQSAEGFIASEKLGADTAA
ASKAAAEEGMREMSKKFKEEGGEVYVSTD
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atggctgatcttccagcaaagaccgaaattggcgtaaccacaggcccgatcagcggatcg
aaaaaagtccatgtcgcgtcccatagcggctccggcatccgcgttgcgatgcgcgagatt
tatctcgagggcggcgaagcgccggtccgcgtctatgacacgtccggcccctataccgat
cccgaggcgctgatcgatatccagaccgggctcaacgaattgcgcagcccgtggataaag
gcgcgcggcgatgtcgaggaagtcacccagcgcgaggtcaagccggaagacaatggccag
ctcggccccgaccgttctggcggcgtcgcgcctttccccaatgtccgccgcaaggtgctc
cgcgccaagccgggcgcgaacgtgtcgcagatgcattatgcgcgccagggcatcatcacc
ccggaaatggaatatgtcgccgagcgcgaaaatctcgggcgcgagcggctcaaggaatat
aagcgcgacggcgaaagctttggcgcgtcgatccccgactatgtcacgccggaatttgtc
cgcgacgaaatcgcgcggggcagggcgatcatccccaacaatatcaaccacccggaaagc
gaaccgatggcgatcggccgcaatttcctggtcaagatcaacgccaatatcggcaacagc
gcggttgcttcggacgtcgccagcgaagtcgacaagatggtctggtcgatccgctggggc
gccgacacggtcatggatctctccaccggccgcaacatccacgacacccgcgaatggatc
atccgcaacagccccgtgccgatcggcaccgtgccgatctatcaggcgctggaaaaagtc
ggcggcgttgccgaggacctgacctgggaaatcttccgcgatacattgatcgaacaggcc
gagcagggcgtcgactatttcaccatccacgccggtgtccgtctgccttatgtgccgatg
gcggccaagcgcgtcaccggcatcgtgtcgcgcggcggatcgatcatggcgaaatggtgc
ctcgcgcatcacaaggaaagcttcctctacgaacatttcgacgacatcaccgagatcatg
aaggcctatgacattgcctacagcctcggcgacggcctgcgccccggctcgattgcggac
gccaatgacgaagcgcaattctccgaactctacacgctcggcgagctgacccaccgcgcg
tggaagtcggacgtccaggtgatgatcgagggccccggccatgtgccgatgcacaagatc
aaggagaatatggaaaagcagctcgaagtctgcggcgaggcgcctttctacacgctcggc
ccgctaaccaccgacatcgcgccgggctatgaccatatcaccagcggcatcggcgccgcc
cagatcggctggtacggcacggcgatgctctgctatgtcacgcccaaggaacatctcggc
ctgcccgaccgcgacgatgtgaaagtcggcgttgttacctataaactggccgcccacgcc
gccgatctcgccaagggccatccagcggcccaggtccgcgacgatgcgctgtcaaaggcc
cgcttcgagtttcgctggcgcgaccagttcaacctcagcctcgaccccgaaaccgcgatg
caatatcacgaccagacgctccccgcagaaggcgccaagaccgcgcatttctgctcgatg
tgtggtccgaaattctgcagcatgaaaatctcgcaagaggtccgcgacttcgccagcaag
cagaaccagagcgccgaaggcttcattgcctcggaaaaactgggtgcggatacggcggcg
gcgagcaaggccgcagcggaagaaggcatgcgcgagatgagcaagaagtttaaagaagag
ggcggagaagtttatgtgtcaacagactaa
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