Sphingorhabdus sp. YGSMI21: CHN51_13585
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Entry
CHN51_13585 CDS
T05308
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
sphy
Sphingorhabdus sp. YGSMI21
Pathway
sphy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sphy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CHN51_13585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphy03400
]
CHN51_13585
Enzymes [BR:
sphy01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
CHN51_13585
DNA repair and recombination proteins [BR:
sphy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CHN51_13585
Prokaryotic type
CHN51_13585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ATW04451
UniProt:
A0A2D3RFH1
LinkDB
All DBs
Position
complement(2823623..2824327)
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AA seq
234 aa
AA seq
DB search
MNDRVQLNDSWKEPLAKEFTSEYMAGLREFLLQEKAAGKQIYPKGEEYFRALDLTPLDKV
RVVILGQDPYHGPGQAHGLCFSVQPGVRPPPSLVNIYKELESDLGLPRPAHGFLEHWAKQ
GVLLLNSVLTVEMANAASHRGKGWEKFTDAIIRLIAAKPEPVVFLLWGSYAQKKASFVQS
VEQGGHHLVLKAPHPSPLSAYNGFFGCKHFSKTNAFLEQNGMAPIDWSLPDVGL
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaccgtgtccaattgaacgatagctggaaagagccgctcgccaaagaattcacc
agtgaatatatggccggtttacgggaatttttgctgcaggaaaaagcggccggcaaacag
atttacccgaaaggcgaggaatattttcgcgcccttgacctcaccccgctcgacaaggtc
cgggtcgtgatattgggccaggatccctaccatggtccgggacaggcgcacggcttgtgc
ttcagcgtacaaccgggtgttcgcccgccgccatcgctggtcaatatctacaaggaactg
gaaagcgatctcggcctgccccgtccagcccatggttttctcgaacattgggccaagcag
ggcgtcctgctgctcaacagcgtcctgacggttgaaatggccaatgccgcgtcccatcgc
ggcaagggttgggagaaatttacagatgccatcatccgcctgatcgcggcaaagccggaa
ccggtcgtgtttctgctatggggaagctatgcccagaaaaaggcctccttcgtacagagc
gttgaacagggcggccaccatctggtgttgaaagcgccccacccctcgccgctgtccgct
tataacgggttcttcggttgcaagcatttcagcaagaccaatgcgtttctggaacaaaac
ggaatggcgccgatcgactggagcctgcccgacgtcggcctttag
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