Sphingorhabdus sp. YGSMI21: CHN51_13880
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Entry
CHN51_13880 CDS
T05308
Name
(GenBank) DNA polymerase III subunit beta
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
sphy
Sphingorhabdus sp. YGSMI21
Pathway
sphy03030
DNA replication
sphy03430
Mismatch repair
sphy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sphy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CHN51_13880
03430 Mismatch repair
CHN51_13880
03440 Homologous recombination
CHN51_13880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sphy03032
]
CHN51_13880
03400 DNA repair and recombination proteins [BR:
sphy03400
]
CHN51_13880
Enzymes [BR:
sphy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CHN51_13880
DNA replication proteins [BR:
sphy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CHN51_13880
DNA repair and recombination proteins [BR:
sphy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CHN51_13880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_2
DNA_pol3_beta_3
Motif
Other DBs
NCBI-ProteinID:
ATW04500
UniProt:
A0A2D3RFK5
LinkDB
All DBs
Position
complement(2894216..2895331)
Genome browser
AA seq
371 aa
AA seq
DB search
MKATIERAALLKSLGHVQSVVERRNTIPILSNVLIEASADGSIKLMATDLDLQVVETVEA
QVDTAGSTTVSAHTLFDIARKLPDGSQVQLDAADGKMKVNAGRARFNLQTLPRDDFPVIA
EGELPTSFELPASSLIQIIDKTRFAISTEETRYYLNGIFLHVQDEETPVLKAAATDGHRL
ARVTLPRPAGAEGMPDVIVPRKCVNELRKLLDENAESSVQVDLSASKIRFTLGTAILTSK
LIDGTFPDYTRVIPTGNDKLLKIDAKSFAQGVDRVSTIATEKTRAVKMALGDDKITLSVT
SPENGKAEEEVPGSYSDDTFEIGFNSKYLMDILGEIEGDTVELHLADASAPTLIRENDKS
TALYVLMPMRV
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcgaccattgaacgcgcggcattgctaaagagcctggggcatgtccagtccgtg
gttgagcggcgcaacaccatccccattctctccaacgtgctgatcgaagccagcgccgac
ggcagcatcaagctgatggccaccgatctcgatctccaggtcgtcgaaacggtggaagcc
caggtcgataccgccggttcgaccaccgtttcggcacacacattgttcgacattgcccgc
aagctgcccgacggttcgcaagtgcaactggatgcagcggacggcaagatgaaggtcaat
gccggtcgcgcccgcttcaatctgcagacgcttccccgcgacgatttcccggtcattgcc
gaaggcgaactgccgaccagcttcgaactgcccgcctcttcgttgatccagatcatcgac
aagacgcgtttcgcgatctcgaccgaagagacccgctattatctcaacggcatcttcctg
cacgtgcaggatgaagaaacgcccgtgctcaaggccgccgcgaccgatggccaccgcctc
gcccgcgttaccctgccccgccctgccggcgcggaaggcatgcccgacgtgatcgttccc
cgcaaatgcgtcaacgaactgcgcaagcttctcgacgagaatgctgaatcatcggttcag
gtcgacctgtcggcgagcaagatccgcttcacactgggcacagcgattctgaccagcaag
ctgatcgacggcactttccccgattacacccgcgtcatcccaaccggcaatgacaagctg
ctcaagatcgacgcaaagagcttcgcccagggcgtcgaccgcgtctcgaccatcgccacc
gagaaaacccgggccgtcaagatggcgctcggcgatgacaagatcacgctctccgtcacc
tcgccggaaaatggcaaggccgaggaagaagttccaggctcctacagcgacgacacgttc
gaaatcggtttcaactcgaaatatctgatggatattctcggcgagatcgaaggcgacacc
gtggaactgcatctcgccgacgccagcgccccgacgctgatccgcgaaaatgacaagtcg
acggcgctctatgtgctgatgccgatgcgggtttag
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