Sphingorhabdus sp. YGSMI21: CHN51_13980
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Entry
CHN51_13980 CDS
T05308
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sphy
Sphingorhabdus sp. YGSMI21
Brite
KEGG Orthology (KO) [BR:
sphy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sphy03016
]
CHN51_13980 (truB)
Enzymes [BR:
sphy01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CHN51_13980 (truB)
Transfer RNA biogenesis [BR:
sphy03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CHN51_13980 (truB)
Prokaryotic type
CHN51_13980 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
ATW04516
UniProt:
A0A2D3RFP7
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All DBs
Position
2912992..2913999
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AA seq
335 aa
AA seq
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MGEAGVRPHGWIILDKPLELGSTQAVGAVKRNLREAGLLGKGKNKLKVGHGGTLDPLATG
VLPIALGEATKLCGRMLDASKIYEFTIGFGTETETLDVEGAVTETSGHRPTLAEVEAILP
QFSGAIEQIPPKYSALKIDGQRAYDLARAGVDVEMKLRGVTIYALGIRGVDSSIRHPELV
SGSPEVLKQVQDDEPLTEITLTANVSKGTYIRSLARDIARALGTFGHVTMLRRTKAGPFT
LKQAISLDKLNEIGKGADIKEYLLPLEAGLDDIPAFDLDPDQARMLRQGLTLDEQDLIGN
PAVNGLFLATENEGSPVALAEIVDGTVKVVRGFNM
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgggagaagccggcgtgaggccacatggctggatcatattggataaaccgctggagctt
ggttcgacgcaagcggtcggggcggttaagcggaatttgcgagaggccggcttgctcggg
aaaggcaagaacaagctgaaggtcgggcatggcgggacgctggatccgctggcgaccggg
gtcctgccgattgcgctgggcgaagcgaccaagctgtgcggacggatgctcgatgcgtcg
aagatttatgaatttacaatcggcttcgggacggagaccgagacgctggatgtcgagggg
gctgtgacggagacttctggccaccggccaactttggccgaagtcgaagcgatattgccg
cagttcagcggggcgatcgagcagataccaccgaaatattcggcgctgaagatcgacggc
cagcgcgcctatgatctggcgcgggcaggggtggatgtggagatgaagctgcggggggtg
acgatatatgctctcggcattcgtggtgttgatagttccattcgtcatcctgaacttgtt
tcaggatctccggaggtcctgaaacaagttcaggatgacgagccactgacagaaatcacc
ctcacggccaacgtctccaaaggcacctatatccgctcgcttgcccgcgacatcgcgcgg
gctctgggcactttcggtcatgtcaccatgttgcgccggaccaaggccgggccattcacc
ctgaaacaggcgatttcgctggacaaactcaacgaaattggtaagggcgcggacattaaa
gaatacctcttgccgcttgaggcggggctggacgacatcccggctttcgacctcgaccct
gatcaggcaagaatgcttcggcaaggcttgacgctggacgagcaggatttgatcgggaac
cccgcagtcaacgggctttttctagcgacagagaatgaaggttctccggtcgctctggca
gagattgttgatggcaccgtcaaggtggtccgcgggttcaatatgtaa
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