KEGG   Sphingorhabdus sp. YGSMI21: CHN51_14975
Entry
CHN51_14975       CDS       T05308                                 
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
  KO
K13599  two-component system, NtrC family, nitrogen regulation response regulator NtrX
Organism
sphy  Sphingorhabdus sp. YGSMI21
Pathway
sphy02020  Two-component system
Brite
KEGG Orthology (KO) [BR:sphy00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    CHN51_14975
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:sphy02022]
    CHN51_14975
Two-component system [BR:sphy02022]
 NtrC family
  NtrY-NtrX (nitrogen regulation)
   CHN51_14975
SSDB
Motif
Pfam: Sigma54_activat Response_reg AAA_lid_14 Sigma54_activ_2 HTH_8 AAA_5 AAA FleQ AAA_2 VpsR AAA_16 AAA_22
Other DBs
NCBI-ProteinID: ATW04691
LinkDB
Position
3120094..3121476
AA seq 460 aa
MALDILVVDDEPDIRDLISGVLEDEGYTTRVAADSDAALAAVNERRPSLVLLDVWLRGSR
LDGLELLTEMKQLDAKMPIIVISGHGNIDTAVAAISQGAVDFIEKPFEAEHLLHLVSRAT
ETERLRRENEILKARVGFADELTGNSAAVNNVRATLKRVAGTGSRLLISGPAGVGKEVAA
RLMHNWSSRSNAAFVTISAARLSPESVEEELFGTERNGKIEKTGLMEEAHGGTLFIDEVA
DMPLDTQGKILRVLTEQSFNRLGGSQKVNVDVRVVSATSRDLEVEIREKRFREDLFYRLN
VVPVVLPPLNQRREDIPVLVDHYAARFAAEQRLQPPEISDEAMAALQACDWPGNVRQLRN
VVERTIILAPKDNFARIEVEMLPPEVLGNDDDLDQGVASLMGSPLREARESFEREYLKVQ
IRRFSGNISKTANFIGMERSALHRKLKILGLASRKKSDAE
NT seq 1383 nt   +upstreamnt  +downstreamnt
atggcgttagatattctggttgtcgacgacgaacccgatatccgtgatcttatatccggt
gttctggaagacgagggctataccacccgggtggccgccgacagcgacgcggcgctggcc
gcagtcaacgagcgccgcccttcgctggtgctgctcgacgtctggctgagaggatcgcgt
ctggacggtctggaactgctgaccgagatgaagcagctcgacgccaaaatgccgattatc
gtgatttccggccatggcaatatcgatacggcggtcgccgccatatcgcagggcgcggtc
gattttatcgaaaagcccttcgaagccgaacatctgctgcatctggtctcgagagcgacg
gaaaccgagcggctgcgccgggaaaacgagattctaaaggcgcgagtcggctttgctgac
gagctcaccggtaattctgctgccgtgaacaatgtgcgtgctacgttgaaacgcgtcgcc
ggcaccggcagccgcctgctgatttccggtccggcaggagtcggcaaggaagtcgccgcg
cggttgatgcacaactggagttcacgctccaatgccgcctttgtcaccatcagcgccgcc
cggttgtcgccggagagcgtggaggaggaactgttcggcacggaacgcaacggcaagatc
gaaaaaaccggcctgatggaagaagcccatggcggaaccctgttcatcgacgaagtcgcc
gatatgccgcttgatacccagggcaagatattgcgcgttttgaccgaacagagcttcaac
cggcttggcggttcgcaaaaggtgaatgtcgatgtcagggtcgtttcggcaacctcgcgc
gatctggaagtcgagattcgcgagaagcgattccgcgaggatctgttctaccggctcaac
gtggtgccggtcgtcctgccgccgctcaaccagcggcgcgaggacataccggttctggtc
gaccattatgccgcccgttttgccgccgaacagcgtctgcaaccgccggagatttccgat
gaagccatggcggcactgcaggcgtgcgactggccaggcaacgtccggcagctgcgcaat
gtggtagagcggacgatcattctggcgcccaaggacaatttcgccagaatcgaggtcgaa
atgttgccaccggaagttctcggcaatgatgacgatctcgaccagggcgtcgcgtcactg
atgggttcgcctttgcgggaagcgcgggaaagtttcgaacgggaatatctgaaagtgcag
atccggcgtttttcgggaaatatctccaagaccgccaatttcatcggcatggagcggtcg
gcgctgcacaggaagctgaaaatattgggcctggcatcgcgcaagaaaagcgacgccgag
tga

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