Sphingorhabdus sp. YGSMI21: CHN51_15205
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Entry
CHN51_15205 CDS
T05308
Name
(GenBank) TonB-dependent receptor
KO
K16092
vitamin B12 transporter
Organism
sphy
Sphingorhabdus sp. YGSMI21
Brite
KEGG Orthology (KO) [BR:
sphy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sphy02000
]
CHN51_15205
Transporters [BR:
sphy02000
]
Other transporters
Pores ion channels [TC:
1
]
CHN51_15205
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Ortholog
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GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
ATW04734
LinkDB
All DBs
Position
3176455..3178392
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AA seq
645 aa
AA seq
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MPKFTQLTARLLGSVALLSAPAAFAQDKPDRESSDELIVVTGTRSGEAITPDIQAGSLTV
IDGSQIVNRQVREVSEVLRDVPGVAVSVVAGQTQLRLRGAEGNHTLFLIDGIEVSDPFFG
EFDVGTLIADDSAQIEILRGQQSALYGSDAIGGVVHYRTLSGAAAPGLSARIEAGSFNSV
NSAARLGGKTGAFDYVVTATMVSTDGQPNARGGTRDLGSDTAAVAFVGNLQATDNLSFGV
VARYSENSGDFNGTEGDTTSPNFGQIIDSPGRGFENQGLYGLVKAELDLMDGRWSHRASA
QFANSERRGFSGGSQSSGSIGKRLKGSYETTAKFTGGALEHRVTFATDIERETYRNDDPS
GFAFTGKRSNENLGLVGLYELEADGRASFSAAIRYDDNDGFANVTTYRVQGAYLLPTGTR
LQAAYGTGVKNPGFFELFGYFDGQYIGNPDLTPEKSEGWEVGVTQNFLQGRGKIGLTYFE
SELEDEIYTTYLPPTFAATPANRDSLSKRNGVETWLEIDLDDSWRINGSYTYMRARENGV
QEVRRPEHIGSIAIDWHLPDDKAGVTLVGRYNGAQQDVAFTDPSYVPVDVRLDDYLLINL
NGRVKIAGNLELFGRVENLFNERYEQVFSFVSPGRSAYAGIRGHF
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaattcacacaattgactgcccggcttctgggtagcgtcgctctgttgtccgct
ccagccgcctttgcccaggacaaaccggaccgggaaagcagcgatgaactgatcgtcgtc
accggaacccgttcgggcgaggctattacaccggatattcaggcaggctcgctgactgtg
attgacggcagccagattgttaaccgccaggtacgcgaggtttccgaagtgcttcgcgac
gtgcccggtgtcgccgtcagcgttgtcgccggacaaacccagttgcgactgcgtggtgcg
gaaggcaatcacacgcttttcctgatcgacgggatagaggtttccgatcccttctttggc
gaattcgatgtcggaacgctgatcgctgacgatagtgcacagatcgagatattgagaggc
cagcaaagcgctctttacggatcggacgccatcggtggcgtggtgcattaccgcaccctt
agcggcgcagccgctccgggcctgtcggcgcggatcgaggcgggctctttcaacagcgtc
aacagcgccgcccgactgggcggaaagacgggtgcttttgactatgtcgtcaccgcaacg
atggtcagcaccgacggccagcccaatgcgcgcggcggaacccgtgatctgggcagcgat
acagcggcagtcgcctttgtcggcaatctgcaagcgaccgacaatttgagcttcggcgtc
gtcgctcgctattcggaaaatagcggtgatttcaacggcaccgaaggcgatacgacgagt
ccgaatttcggacagatcatcgacagcccgggccggggctttgaaaatcagggcctctat
ggtttggtgaaagccgagctggatctgatggacggtcgctggtcgcatcgggcttccgcg
caatttgccaacagcgaaagacgcggattttccggtggatcgcaaagctccggcagcatc
ggcaagcggctcaagggcagctatgaaacgactgcaaaatttaccggcggcgcgctggag
caccgggtgacatttgccaccgacatcgaacgcgagacctatcggaacgacgacccgtcc
ggattcgccttcaccggaaaaagaagcaacgagaatctcggactggtcgggctctacgaa
ctggaagccgacggccgggcatcgttcagcgcagcgatccgctatgacgataatgacggc
tttgccaatgtgaccacctatcgcgtgcagggtgcctatctgctgcccaccggaacccgg
ttgcaggccgcctatggcacaggcgtcaagaatcccggattcttcgaactgtttggctat
tttgacggccagtatatcggcaatcccgacctcactccggaaaagtcggaaggatgggaa
gtcggcgttacgcagaatttcctccagggccggggcaagattggactgacctatttcgaa
agcgagctggaagacgaaatctacacgacctatctgccaccgaccttcgccgcgacgccg
gccaaccgggacagtctttcgaagcgcaacggcgtcgagacctggctcgaaatcgatctg
gatgacagctggcggatcaacggcagctatacctatatgcgggcgcgtgaaaatggcgtg
caggaagtgcggcgaccggaacatatcggaagcattgccatcgactggcatttgccggac
gacaaggccggggtaaccttggtgggtcgctataacggcgcgcagcaggatgtggccttc
accgaccccagctatgtgcccgtcgatgtccgcctcgacgactatctgctgatcaacctg
aacggtcgcgtcaaaattgccggcaatctcgagctgttcgggcgcgttgaaaacctgttc
aatgagcgttatgaacaggtgttcagtttcgtttcgcccggtagatctgcctatgccggc
attcgcggtcatttttga
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