Sphingorhabdus sp. YGSMI21: CHN51_15995
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Entry
CHN51_15995 CDS
T05308
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
sphy
Sphingorhabdus sp. YGSMI21
Brite
KEGG Orthology (KO) [BR:
sphy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sphy03032
]
CHN51_15995
03036 Chromosome and associated proteins [BR:
sphy03036
]
CHN51_15995
03400 DNA repair and recombination proteins [BR:
sphy03400
]
CHN51_15995
DNA replication proteins [BR:
sphy03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CHN51_15995
Chromosome and associated proteins [BR:
sphy03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
CHN51_15995
DNA repair and recombination proteins [BR:
sphy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
CHN51_15995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
DUF2267
Motif
Other DBs
NCBI-ProteinID:
ATW04867
UniProt:
A0A2D3RI44
LinkDB
All DBs
Position
complement(3340921..3341196)
Genome browser
AA seq
91 aa
AA seq
DB search
MNKQDLISNVADHSGLSKSDAGKAVDAVFDSISSALSSGGEVRLVGFGTFSTSKRKASTG
RNPRTGEPMQIPASTQAKFKAGKGLKDAVNK
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaataaacaggaccttatcagtaacgtagcggatcacagcggcctcagcaaaagcgat
gccggcaaagcggtagacgccgtatttgattccatcagcagtgcattgtccagcggcggc
gaagttcgtctcgttggcttcggcacattctcgacctccaagcgcaaagcttccaccggc
cgcaacccgcgcaccggcgaaccgatgcagattccagcatcgacccaagcaaaattcaaa
gccggcaagggcttgaaagacgctgtcaacaagtaa
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