Sphingorhabdus sp. YGSMI21: CHN51_16175
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Entry
CHN51_16175 CDS
T05308
Name
(GenBank) pyridoxal-dependent decarboxylase, exosortase A system-associated
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
sphy
Sphingorhabdus sp. YGSMI21
Pathway
sphy00300
Lysine biosynthesis
sphy00470
D-Amino acid metabolism
sphy01100
Metabolic pathways
sphy01110
Biosynthesis of secondary metabolites
sphy01120
Microbial metabolism in diverse environments
sphy01230
Biosynthesis of amino acids
Module
sphy_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sphy00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CHN51_16175
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CHN51_16175
Enzymes [BR:
sphy01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
CHN51_16175
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
ATW04896
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All DBs
Position
complement(3378991..3380226)
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AA seq
411 aa
AA seq
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MIKTKATGPIPSGFHALDGELALGGQRAGALVAEHGSPLFVYSRSRLDDRMMQLRAAMPD
RLDLHYAMKANPFPPLLRHMVGLADGIDIASGGELQMALAAGAAPDHVSFAGPGKRDEEL
QQAIQAGVTINIESPGECDRALKIGAALEKQPRLAIRVNPDFDLKGSGMKMGGGAKPFGM
DIELVAPVVKQILEAGAEWRGFHIFAGSQALSADAIIETQAQTLDLAGRLAIEIGEAPAH
VNLGGGFGIPYFPGDEPLDIGKVGNALSDQLTRLPSILSSTQFAIELGRYLVGEAGVYLT
RIIDRKQSQGQTFLVTDGGLHHQLAASGNFGTVVRRNYPAAIASKFSEEPTETVSIVGCL
CTPLDRLSDNAAMPEATVGDIVAVFCAGAYGASASPANFLGQGPATELLVD
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgatcaagaccaaggccaccggcccgatcccctccggttttcacgcccttgacggcgaa
ctggccctcggtggccagcgagccggtgcgctggtcgcggaacatggttcgccgcttttt
gtctattcccgaagccggctcgacgaccgaatgatgcaattgcgggcggcgatgcccgac
cgcctggatctgcattatgcgatgaaggccaatccctttccaccgttgctgcgccatatg
gtcggcctggccgacggcatcgatatcgcttccggtggggaattgcagatggcgctggca
gcgggcgcggcaccggaccatgtcagcttcgccggaccgggcaagcgcgacgaggaactc
cagcaggcaatccaggccggtgtgacgatcaatattgaatcgccgggcgaatgcgatcgg
gcactgaaaatcggtgccgcgctggagaaacagccgcggctggcgatccgggtcaatccg
gacttcgatctcaagggctcggggatgaaaatgggcggcggcgccaagccgttcgggatg
gatatcgagctggtcgcgccggtcgtaaaacagattctggaagccggtgcggagtggcgc
ggctttcatatttttgccggctcgcaggcgctcagcgcggacgcgattatcgaaacacag
gcgcaaacgctggacctcgcgggtcggctggcaatcgaaatcggcgaggcgccggcccat
gtcaatctcggtggcggttttggtattccctatttcccgggagacgaaccactggacatc
ggcaaggttggcaacgccttgtcggatcagctcacccggctaccgagcatattgtcatcg
acacaatttgccattgaactcggccgctatctggtcggcgaggcgggtgtctatctgaca
cggataatcgatcgcaagcagagccaggggcagacctttctggtaaccgacggcggcctg
catcaccagctcgccgccagcggcaatttcgggacggtggtaagacgcaactatcccgct
gcgatcgccagcaaattttctgaggaaccgaccgaaacagtctcgatcgttggctgtctc
tgcaccccccttgaccggctcagcgacaatgcggccatgcccgaagcaacggtcggtgac
atcgtggcagttttctgtgccggagcatatggtgcctcggcaagtccggccaattttctg
ggccagggacctgccacggagctgctcgtcgactag
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