Sphingorhabdus sp. YGSMI21: CHN51_16350
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Entry
CHN51_16350 CDS
T05308
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
sphy
Sphingorhabdus sp. YGSMI21
Brite
KEGG Orthology (KO) [BR:
sphy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sphy03032
]
CHN51_16350
03400 DNA repair and recombination proteins [BR:
sphy03400
]
CHN51_16350
Enzymes [BR:
sphy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CHN51_16350
DNA replication proteins [BR:
sphy03032
]
Prokaryotic type
DNA Topoisomerases
CHN51_16350
DNA repair and recombination proteins [BR:
sphy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CHN51_16350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
ATW04922
LinkDB
All DBs
Position
3412332..3415088
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AA seq
918 aa
AA seq
DB search
MNEQTTPPSPSNIEPIDIVDEMKTSYMDYAMSVIVSRALPDVRDGLKPVHRRILYAAQEG
GMVAGRPYRKCAKIVGDVMGNYHPHGDSAIYMALARMTQDWSMRVPLIDGQGNFGSMDPD
MPASMRYTEARLNKVSNFLLNDLDKDTVDFIPNYDGSLQEPSVLPARFPNLLVNGAGGIA
VGMATNIPPHNLGEVINASLAYIENPGITIDELIEIVPGPDFPTAPLILGQSGARAAYKD
GRGSIMMRARHEIEEGRGDKRSIVLTSIPFQVGKSGLVEKIAEAAKDKRIEGVSDIRDES
SRAGVRVVIELKRDATPDVVLNQIWRFTPAQSSFPANMLAIRGGRPEVLTLRDIIESFVK
FREEVITRRTKFELNKARERAHILLGLVVAVTNMDEVVRIIRGSSTPAEARESLLRREWP
IAEIAAYIRLVEATETDVEGDSYKLSPVQVKAILDLRLQKLTALGREEIGDELKELAAAI
EEYLAILADRAKLYAVMREELEEVRDQFATPRLSEITAAWDGLEDEDLMERSEMVVTVTH
GGYIKRTPLDTFRAQRRGGKGRAGMATKDEDAVTELFVTSTHTPVLFFSTHGKVYRLKVW
KLPEGGPQTKGRPMINLLPLADGETISTVLPLPEDEAEWADLHVMFATAKGSVRRNSMDS
FTNVPSNGKFAMKFDEGSEDRLIGVKLLTDDDDVLLATKNGKAIRFAGDAVRSFQSRTST
GVRGIALKGDDEVISLSVLRGFEASTEERDQYLKAAPWKDNENAPELSAERMAEFSETED
FILTVCANGYGKRSSAYEYRQSGRGGQGILNIDNIERNGTVVASFRASDDEQVMLVTDQA
KLIRMKVADMRVIGRNSSGVKLFDVAKGEHVVGAAKIDEEEEPENEAEDAVVEEMVDQGV
SDGDVAAEPEAPEEDSAE
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgaacagaccactccaccgtcgccatccaatatcgaaccgattgatatcgtcgac
gagatgaaaaccagctatatggactatgccatgtcggtcatcgtcagccgtgcgctgccc
gatgtccgcgacggtctgaagccggtccatcgccggatattatatgcagcgcaggaaggc
ggcatggtcgccggacggccctatcggaaatgcgcgaaaatcgtcggtgacgtgatgggc
aattatcatccccatggcgacagcgcgatctatatggcgcttgcccggatgacccaggac
tggtcgatgcgcgtgccgctgatcgacggtcagggcaatttcggatcgatggatccggat
atgccggcgtcgatgcgttataccgaagcgcgactgaacaaggtttccaatttcctgctc
aacgatctcgacaaggacactgtcgatttcattcccaattatgatggcagcctgcaggag
ccaagcgtgctcccggcccgcttccccaatctgctggtcaatggcgccggcggtatcgcg
gtcggcatggcgaccaatatcccgccgcacaatctgggtgaggtgatcaacgccagcctc
gcctatatcgaaaatcccggcatcacgattgacgagttgatcgaaattgtgcccggtccc
gatttcccgaccgcgccgttgatcctcggccagtccggcgcccgcgcggcctacaaggat
ggccgcggatcgatcatgatgcgcgcccgccacgagatcgaggaaggacgcggcgacaag
cgctcgattgtcctgacatcgatcccctttcaggtcggcaagtccggtctggtcgaaaaa
atcgccgaagccgcgaaagacaagcgcatcgagggcgtctccgacatccgcgacgaatcc
agccgcgccggtgtccgcgtggtcatcgagctgaaacgcgacgcgaccccggatgtggtg
ctcaaccagatatggcgcttcacccctgcccagtcgagcttcccggccaatatgcttgcg
attcgcggcggccgccccgaagtgttgacgctgcgcgacattatcgaatccttcgtcaaa
ttccgcgaggaagtgatcacccgccgcaccaagtttgaactgaacaaggcgcgcgagcgg
gcgcatatcttgctcggtctggtggttgcagtcaccaatatggacgaagtcgtgcggatc
atccgcggttcctccaccccggccgaagcacgcgaatccctgctccgccgcgaatggccg
atcgccgagattgccgcctatatccggctggtcgaagcgaccgaaaccgatgtcgagggc
gacagctacaaattgtcgccggtccaggtgaaagccatattggatctgcgtttgcagaaa
ctgacggcgctcggccgcgaggaaatcggcgacgagttgaaagaactggccgccgctatc
gaggaatatctcgctatactggccgaccgcgcgaaactctatgcggtgatgcgcgaagaa
ctggaagaagtgcgcgaccagttcgccacgccgcgcctctccgagataaccgcagcctgg
gacggtctggaagacgaagatctgatggaacggtccgaaatggtcgtgaccgtcacccat
ggcggctatatcaagcggacaccgctcgatacattccgtgcgcagcgtcgcggcggcaaa
ggccgcgccggcatggcgaccaaggacgaggatgcggtcaccgaattgttcgtgacctcg
acccatacgccggtgctgttcttctcgacccacggcaaagtctatcgcctgaaagtctgg
aaattgccggaaggcggaccgcagaccaagggccggccgatgatcaacctgctgccgctg
gcagacggggaaaccatttcgactgtcttgccattgccggaagacgaagccgaatgggcc
gatctgcacgtcatgttcgcgaccgccaagggcagcgtccggcgcaacagcatggacagc
ttcaccaacgtgccatccaacggcaaattcgcgatgaaatttgacgagggcagcgaagac
cgcctgatcggcgtgaagctgctgaccgatgatgacgatgttttgctcgcgaccaagaac
ggcaaggcgattcggttcgcaggtgatgcggtccgctccttccagagccggacatcgacc
ggcgtccgcggtatcgcgctgaagggcgacgacgaggttatctcgctgtccgtcctgcgc
ggtttcgaagcctcgaccgaggagcgcgaccagtatctcaaggcggctccgtggaaggac
aatgaaaacgcacccgaactgtccgccgagcgcatggccgaattcagcgagaccgaggat
ttcatccttaccgtctgcgccaatggctatggcaagcggtccagcgcctatgaatatcgc
cagtccggtcgcggtggccagggcattctcaacatcgacaatatcgagcgtaatggcacg
gttgtcgccagcttccgggcgtcggatgacgaacaggtcatgctggtgaccgaccaggcc
aagctgatccgcatgaaggtcgcagacatgcgcgtgattggccggaacagctcgggcgtc
aaattgttcgacgtcgccaagggcgaacatgtcgtcggcgcggccaagattgacgaggaa
gaagaaccggaaaacgaagcggaagacgcagtggtcgaggaaatggtcgatcagggcgtt
tccgacggtgacgttgcggctgagccagaagctccggaagaagacagcgccgaatga
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