Sphingorhabdus sp. YGSMI21: CHN51_16535
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Entry
CHN51_16535 CDS
T05308
Name
(GenBank) ATP-dependent DNA helicase RecG
KO
K03655
ATP-dependent DNA helicase RecG [EC:
5.6.2.4
]
Organism
sphy
Sphingorhabdus sp. YGSMI21
Pathway
sphy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sphy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CHN51_16535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphy03400
]
CHN51_16535
Enzymes [BR:
sphy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CHN51_16535
DNA repair and recombination proteins [BR:
sphy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CHN51_16535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecG_dom3_C
ResIII
RecG_wedge
AAA_30
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
ATW04956
UniProt:
A0A2D3RH02
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All DBs
Position
complement(3448454..3450511)
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AA seq
685 aa
AA seq
DB search
MRPEILNPLFGETQSLKGVGKVLAKPLEKLRLTRVKDLLNHQPSYWIHRKRVEELDEVDV
GETIIVEVTPVDYRTGGPRSPLRVHATDKLGNYISLTFFGRNPGWPKKLLPLGESKVISG
KLERYGDELQMVHPDQVLEPGQGDSIALLEPIYPLAEGLGNGRMKQLVGQALALAPTLPE
WIEPSQLAAKDWKSWKDSIVALHRVESEDSSDRLAYDEVFANQLAFMLVRASNRSKKGIP
IQGDGRLRDRLKLPFELTDAQKRCIVEIEGDLAQNAPMLRLLQGDVGSGKTLVALMALLS
AVEAGYQGAFLAPTEILARQHYEGLQKLLTGLPVNIAILTGRDKGKVREATLMGVMDGSI
NILIGTHAIFQDHVKYRNLAVAVIDEQHKFGVSQRLMLTQKAERTPHLLAMTATPIPRTL
TLSQYGEMDVSRIDELPPGRQTIDTSVISDARMADVVEGLARHIASGGQAYWVCPLIDES
EKSDLAAAEDRAAALSARFGDQVGLVHGRMKGPEKDLVMTRFQRDEIKVLVATTVIEVGV
DVPNASLMIIEAADRFGLAQLHQLRGRVGRGSVKSNCLLIRGETLSETARARLTLMRETN
DGFRIAEEDLRLRGAGELLGTRQSGDAGFRIATPAQVNEFIGAATDDARLLLERDGGLDS
ERGQAARVALYLFERDWGVSLLRSG
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgcggcccgagatactcaatccattatttggcgaaacccagtcgcttaaaggcgtcggc
aaggtgctggccaagccgcttgaaaagctgcggctgactcgggtcaaggatctgctcaac
catcaaccaagctactggatacatcgcaaacgcgttgaggaactcgatgaagtcgatgtc
ggcgagacgatcatcgttgaggtgacacctgttgattatcgtaccggcgggccacgcagt
cccttgcgggtccacgctacggacaagctgggcaactatatcagtctaaccttttttgga
cggaatccgggctggcccaagaaactgctgccgctgggtgagtccaaggtcatttccgga
aagctcgaacgctatggcgacgaactgcaaatggtccatccggatcaggttctcgaaccc
gggcagggcgacagcatcgcgcttctggagccgatctatcctttagcagaagggttgggc
aatgggcgaatgaagcagctggttgggcaggccttggcgctagctccgacgttgccggaa
tggatcgaaccgagccagcttgctgcgaaagactggaagagttggaaggacagtatcgtt
gcccttcatcgcgtcgaaagcgaagatagcagtgacaggctcgcctatgatgaggtattt
gccaaccaacttgccttcatgctggtgcgtgccagcaaccggagcaagaaaggcattcct
attcaaggcgatggcaggttacgcgacaggttgaagctgccgtttgagctgaccgatgcc
cagaagcgttgcattgtcgaaattgaaggcgatctcgcgcaaaacgctccgatgttacgg
ctgcttcaaggtgatgtcggctcgggaaagactctggtggcgctgatggcgctgctgtct
gcggtagaagcgggctatcagggtgcttttctggcgccgacggaaattttggcacggcag
cattacgaaggactccagaaattgctgacgggccttccggtcaacatcgccatattgacc
ggacgcgacaaggggaaggttcgcgaggcgacactgatgggagtgatggatggttcgatc
aatatcctgatcggaacgcacgcgatatttcaggaccatgtgaaatataggaatctcgcc
gtcgcggtcatcgatgagcagcataaattcggcgtgtctcagcgccttatgctgacgcaa
aaggccgagcgtacgccgcatttgctggcgatgaccgcaaccccgatcccgcggacgctt
actttgagtcaatatggcgaaatggatgtgtcccgcatcgacgaactgccacccggacgg
cagacgatagacaccagcgtgatctccgacgcacgaatggcggacgtggttgaggggctg
gcccgccatatcgcttccggcggtcaggcctactgggtctgtcccctgattgacgagagc
gagaagagcgatctcgcggcggctgaggaccgcgccgctgcattgtctgcacgcttcggt
gatcaggtcggcctggtgcacggtcggatgaaggggccggaaaaagatctggtaatgacc
cgcttccagcgcgacgagattaaggtgctggtggccaccacggtgatcgaggtcggggtc
gatgtgcccaatgccagcctgatgattatcgaagctgccgaccgttttggtctcgcccag
ttgcaccagctccgcggacgggtgggccgggggagcgtcaagtccaactgcctgctgatt
cgaggcgaaacgctgagcgaaacggcgcgcgcccgcctcacgctgatgcgcgagaccaac
gacggctttcgtatcgccgaggaagacttgcggttgcgcggggcgggggaactgctcggt
acccgacaatcgggtgatgccggctttcgtattgcgacgcccgcacaggtgaatgaattt
atcggagcggcgaccgatgatgcgaggcttttgctcgaacgggatggtggcctggacagc
gaaagagggcaggcagcgcgtgttgccctttatctgtttgaaagggactggggcgtcagt
ctgttgcgcagtggatag
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