Sphingorhabdus sp. YGSMI21: CHN51_16610
Help
Entry
CHN51_16610 CDS
T05308
Symbol
addA
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
sphy
Sphingorhabdus sp. YGSMI21
Brite
KEGG Orthology (KO) [BR:
sphy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphy03400
]
CHN51_16610 (addA)
Enzymes [BR:
sphy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CHN51_16610 (addA)
DNA repair and recombination proteins [BR:
sphy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
CHN51_16610 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
DUF2800
AAA_12
DEAD
Motif
Other DBs
NCBI-ProteinID:
ATW04970
UniProt:
A0A2D3RGY0
LinkDB
All DBs
Position
complement(3468105..3471557)
Genome browser
AA seq
1150 aa
AA seq
DB search
MSSEKPKIFPLKDRQIDAVEPDAHIWLSASAGTGKTQVLTARVFRLLLTEKIDPEHILCL
TFTKAGAAEMAERINRQLAAWVRMDDTLLENDLRAIGASTGPEARARARTLFAQVLDAQG
GGLRIMTIHGFCQSLLASFPEEAGIASMFKPIEDRDQKILAREALGDLLLEEEQAGRPQI
VEAIQRLSVRMGEEATEQFLMTCAAKAEAMDGLPSGILPFVRQLLGLPIDGDAQSWLASR
CTDEAIDLRAITLLRDAMAEAGGKKEQERQLAIRLWLSLNPQERAAALPDVHLAWATKST
GAPPKPTKGLLKALPDYDFIAGSLYEWSSDLLGKAVLFEYADLFAGALQAGQAFYHRYAD
AKKLHGVVDFDDMIRMTARLLQKSDMAEWIRYKLDQRTDHILIDEAQDTNVAQWDIVRAL
AGEFFAGIGVKPERHRTLFTVGDFKQAIFGFQGTSPHNYANARTEFFALAEASEQPFGDL
SLDRSFRSTPPILKVVDATLEQLGHEQLGLDHRVPEHRSNYQDASGSVTLWKPIANRSDA
DDEDEESWASEEKRVIAQQLAVQIKQWLSPENPLWLERQKRALQPKDILILVSKRDELSA
LIVARLFAEKVPVAGIDRIRLNQPLVVQDLLAAIRFVLQPNDDLNLASLLVSPLLGWTQE
DLLARGHRGKANGEKSLWEFLRRQDGLGEQIKPLQQLLAMADFNTPYQFLETILSGPMQG
RRKLLSRLSHAAVDPLDELLATALAFERDHIPTLQGFLDWFDRGDVEIKREQVEGGNEVR
LMTVHGAKGLQAPLVILANATFDPASKKSGGFSIKLGEGTGRELEYPVVPVRKAERVGIL
AEHAAYADKVAMEEHWRLLYVAMTRAEEHLVVAGVLGPRAKGEVPELSWYGAMERGLTAL
GSEWREDPDWQAVREYRTESRNRPAAPAAPERAADGAGDHVPAPDWLFRAAPEESRPPRP
LTPSHLGPDDASNPPPDLTMRDAAERGILLHSLFQRLPNIAPARRMDVADRWLEKQKQIT
DPARRAEIIQTVLTVMGNPAWSALFAPESLAEAPIAAVVGEHVISGTVDRLLITDDQIYV
VDFKTGRRVPDSAEQAPVAYLRQMAAYVAALEKIFPDRSIKAGLLYSHGPQMLELAPDLI
ERHKPGFEPI
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgagtagcgaaaagccgaaaatctttccgctgaaggaccggcagatcgatgcggtcgaa
cccgatgcccatatctggcttagcgcgtcggccggaaccggcaagacccaggttctgact
gcgcgcgtttttcgcctgctgctgaccgaaaagatcgatcctgaacatattctctgcctg
accttcaccaaggcgggcgcggcggaaatggcggagcggatcaaccggcaactggccgcc
tgggtgcggatggacgacaccctgctggaaaacgaccttcgcgccatcggcgcgtcgacc
ggacccgaggcgagagcccgggcgcgaaccttattcgcccaagttctcgatgcgcagggc
gggggcctgcggatcatgacgatccacggcttctgccagtccttgctcgcgtcgttcccg
gaagaggccggcatcgcctcgatgttcaagccgatcgaggaccgcgaccagaagatattg
gcgcgcgaggccttgggcgatttgctgctcgaggaagaacaggccgggcgcccgcagatt
gtcgaagcgattcagcgtttgagcgtccggatgggcgaggaggcgaccgagcaatttctg
atgacttgcgccgccaaggccgaagcgatggacgggctgccgtccggcatcttgcccttc
gtccgtcagctgctgggcctgccgattgacggcgatgcccagtcgtggctggccagccgc
tgcacagatgaagccattgatctgcgcgcaattaccctgttgcgcgatgcgatggcggaa
gccggcggcaagaaggaacaggagcggcagctcgcgatccgcctctggctgagcctcaat
ccgcaagaacgcgcagcagccttgcctgatgttcatctggcctgggcgaccaaatccacc
ggagccccgcccaaacccacgaaaggcctgctcaaagctctgccagactatgatttcatc
gccggatcgctgtatgagtggagcagcgaccttctcggaaaagcggtcctgttcgaatat
gccgacctgtttgcgggcgcactgcaggccggacaggctttctaccatcgctatgccgat
gccaaaaagctgcacggcgtggtcgatttcgacgacatgatccggatgaccgcccggctg
ttgcagaaaagcgatatggcggaatggatccgctacaagctcgaccagcgtaccgatcat
atattgatcgacgaggcgcaggataccaatgtcgcgcaatgggatatcgtccgcgcgctg
gccggtgaattttttgccggcataggcgtgaagcccgagcggcaccggacgctgttcacg
gtgggcgattttaaacaggctatcttcggctttcagggcactagtccgcataattatgcc
aatgcgcgcaccgaatttttcgcgctggcagaggcatcggaacagccgtttggcgacctg
tcgctggaccgcagtttccgctcgacgccgccgatattgaaagtggtcgatgcgacgctg
gaacagctgggccacgaacagctggggctcgatcatcgggtccctgagcatcgcagcaac
tatcaggatgcgagcggtagcgtgaccttgtggaaaccgattgccaacagaagcgatgcc
gacgatgaggacgaggaatcctgggccagcgaagagaaaagggtcattgcccagcagctg
gctgtgcagatcaagcaatggctgtcgccggaaaacccgctttggctggaacggcaaaaa
cgggcgctgcaacccaaggatatattgatattggtgagcaagcgcgacgagctcagtgcg
ctcatcgttgcccgtctgtttgccgaaaaggttccggtggcggggattgatcgtatccgc
ctcaaccagccgctggttgttcaagacctgctggccgcgatccgcttcgtgctacagcca
aatgacgatctcaacctcgccagcctgctggtttcgccgttgctcggctggacgcaagag
gatctgctggcgcgcggtcatcgcggcaaggccaatggcgagaagagcctctgggaattt
ctgcgccgacaggacggtctgggagagcagataaagccgttgcagcagctgctggcgatg
gccgatttcaacacgccctaccagtttctcgagacgatattgtccgggccgatgcagggg
cggcgcaaattgctctcccggcttagccatgcggcggtcgatccgctggacgaactgctg
gcgaccgccctggccttcgagcgggatcatatcccgaccttgcagggttttctcgactgg
ttcgaccgcggcgatgtcgaaatcaagcgcgagcaggtcgagggcggcaatgaagtgcgg
ctgatgaccgttcatggcgcaaagggattgcaggcgccgcttgtgatccttgccaatgcg
acctttgacccggcgagcaagaaaagcggcggtttcagcatcaaactgggcgaagggacc
ggtcgcgaactggaatatccggttgtcccggtccgcaaggccgagcgcgtcggcatattg
gctgaacatgccgcctatgccgacaaggtcgcgatggaagaacattggcggctgctctac
gtcgcgatgacccgcgcggaagaacatctggtcgttgccggcgtgctcggacccagagcg
aaaggcgaagtgccggaactgagctggtatggggcgatggagcgcggtctgacggccttg
ggcagcgaatggcgcgaagacccggactggcaggctgtgcgggaatatcggacggagagc
cggaacaggcccgctgcaccggcggctcccgaaagagccgctgacggggcaggggatcat
gtgccggcgccggactggctgttccgggctgctccggaagaatcccgcccgccgcgaccc
ttgaccccctcgcatctcggccccgacgatgccagcaatccgccgccggacctgaccatg
cgtgacgctgccgaacgcgggatattgttgcacagcctgtttcagcgcctgccgaatatc
gcgccggcgcgccggatggatgtcgccgaccgctggctggaaaagcagaagcagatcacc
gatccggcgcgccgcgcagagatcatccagacggtgctgacggtcatgggcaatccggcc
tggtcggcgcttttcgcgccggaaagtctcgcagaagcgccgatagccgcggtggtcggc
gaacatgtcatttccggcacggtcgaccgcctgctgatcaccgacgatcaaatctatgtc
gtcgatttcaagaccggccgccgggtgcccgacagtgccgaacaggcgcccgtcgcctat
ctgcgccagatggcggcctatgtcgccgcgctggaaaagatattcccggatcgttcgatc
aaggccgggctgctctattcgcacggcccgcaaatgctggaactggccccggatctgatc
gagcggcacaagccgggctttgagccgatatga
DBGET
integrated database retrieval system
