Sphingorhabdus sp. YGSMI21: CHN51_16615
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Entry
CHN51_16615 CDS
T05308
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
sphy
Sphingorhabdus sp. YGSMI21
Brite
KEGG Orthology (KO) [BR:
sphy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphy03400
]
CHN51_16615 (addB)
Enzymes [BR:
sphy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CHN51_16615 (addB)
DNA repair and recombination proteins [BR:
sphy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
CHN51_16615 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
ATW04971
UniProt:
A0A2D3RH08
LinkDB
All DBs
Position
complement(3471550..3474549)
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AA seq
999 aa
AA seq
DB search
MSDRRRPAIYNIAAHGGFADALAQGLIDRFAKDAFGLARGLVILPNNRAQRALQEAFVRL
SEDGLLLPQMAVIGDLDLDESIGVALDSGELALDIPAAVDPMDRLLTLAQLIQKEIRLRD
DAILAKDALRLAREFASTLDQLNVEEISLADLMKTEPESLDLSSHWQDSYRFFLVIAEKW
RQQLEKWQRVDQAIRRNALFDHIAKSWKTSPPDHFVVAAGITTSAPAVARFLETIAFMPQ
GLVVLPDLDLIMPDQEWDMLGPFQPDPDSGYIKRAQETHPQYHMKLLLDRMSIARGEILR
WPRTGESGAAAQRSRALSNAFAIPKLTVRWQTLESSERSLAGVQTIEARNSAEEAQVIAL
LAREALEDPDQRVAIVTPDRSLATRISAHLKRWDIQVDDTAGQPLAKLPEGVFFLNLLSA
VADGFPPAEFLALLKHPLVQRGEGRLLWLDHVRKLDLLLRGPRPAPGLAGIDALLRTDNH
RTKSLRAAITPWWQSVRTMFEPMESLFASSLDWPKLLDQLRQLAENLTDGAIWAGPGGRD
LADLLAKLQTRAEMGPIRIKANELPGYFETLMTDISVRPPYGGHPRIALYGLLEARLQQS
ELVICCGLNEGSWPQAITPDPWLAPMIRKSLGLPAQERQIGLSAHDLVGAMGAKKVILSR
AHRDDSGPAIASRFLLRLKGMCGDNLKEHPQARAWLAAIDQPESEPAPYVRPAPLPSREQ
RLIPISVTQVDSLIADPYSFYAKKIMGFAALDMIDADPSAAWRGTIIHDILDQWAREDDY
APAALRQRAKAFLDDPGLHPLMRSLWAPRLLEGLDWIAATLAEGRKTGREPLASEIYGKA
EIAGVELSGIADRIDGMPDGGIAIVDYKTGGAPSNKAVAEGYNLQLGLLAAIAELGGFKD
IEGEAVAFEYWSLAKKGGTDEFGYIRSPAKGRGENIIPADAMVDHAVARFNEAADHYLKG
SEPMTAKLHPEYARYADYDQLMRLEEWYGRAPAEAPDHE
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaccgccgtcggccagcgatctacaatatcgccgcgcacggcggtttcgccgat
gcgctggcacagggactgatcgaccgctttgccaaggacgcattcggactggcccgcggg
ctcgtcatattgcccaacaaccgcgcccagcgggccttgcaggaagcgttcgtgcggctg
agcgaagacgggctgttgctgccgcaaatggcagtgatcggtgacctcgatctggacgaa
tccatcggtgtagcgctcgactccggcgaactggcgctcgatattccggcggccgtcgat
ccgatggaccggctgctcacgctggcgcaactgatccagaaagaaatccggctgcgtgac
gatgccatattggccaaggacgcactgcggctggcgcgcgagtttgccagcacgctcgac
cagctgaatgtcgaggaaatctcgctggccgatctgatgaagacagagccggagagcctc
gacctgtccagccactggcaggattcctatcgcttcttcctggtcatcgccgaaaaatgg
cggcagcagctggaaaaatggcagcgggtcgatcaggcgatccgccgcaacgccctgttc
gatcatatcgccaaaagctggaagacatcgccacccgaccatttcgtcgttgccgccggc
atcaccacctccgcgcccgccgttgcccgttttctggaaaccatagccttcatgccacaa
ggactggtggtcctgcccgacctcgacctgatcatgccggaccaggaatgggatatgctg
gggcccttccagcccgacccggacagcggctatataaagcgcgcgcaggagacccatccg
caatatcatatgaaattgctgctcgaccggatgtcgatcgcgcggggtgaaatattgcgc
tggccgcgcaccggcgaaagcggcgcagcggcgcagcgcagccgggcgctgagcaatgct
ttcgcgatcccgaaactgacggtgcgctggcagacgctggaaagcagcgaacgcagtctc
gccggggtgcagacgatcgaggcacgcaacagcgccgaagaagcgcaggtcatcgcgctg
ctggcgcgcgaggcgctggaagacccggaccagcgggtggcgattgtcacgccggaccgg
tctttggcaacgcgcatctcggcccatctgaaacgctgggatatccaggtagacgacacg
gccggccagccactggcgaagctgccggagggtgtgttcttccttaacctgttatccgcg
gttgccgacggattcccaccggcggaatttctcgccctgctcaagcatccgctggtgcag
cggggcgaggggcggcttttgtggctcgaccatgtccgcaagcttgacctgttgctgcgc
ggcccgcgtccggcaccgggactggcgggcattgacgcgctcttgcggaccgacaatcac
cggacgaaaagcttgcgcgccgccatcacgccatggtggcaatcggtgcgcacgatgttc
gagccgatggaaagtctcttcgcctcttcgctcgactggccgaaactactcgaccagctg
cggcaactggccgagaatttgaccgatggcgcgatctgggccggtccgggtggccgggat
ctggccgacctgctggcaaagctgcagacccgcgcggaaatgggaccgatccggataaag
gcaaatgagctgcccggctatttcgagaccctgatgaccgatatttcggtgcgtccgccc
tacggaggccacccgcggatcgcgctttacggcttgctcgaagcgcggctgcaacagtcg
gaactggtgatctgctgcggtctcaacgaaggcagctggccgcaggcgattacgcccgac
ccatggctcgcgccgatgatccgcaaatcactgggcctgccggcacaggaacggcagatc
ggtctttccgcacacgatctggtcggcgcaatgggcgccaaaaaagtcattctctcccgc
gcgcaccgggatgattccggcccggccattgcctcgcgcttcctgctccggctgaagggc
atgtgcggggacaatctgaaggaacatccgcaggcccgcgcctggttggccgcgatcgac
cagccggaaagcgaacccgcgccctatgtccgtccagcgccgctgccgagcagggaacag
cgccttatcccgatttcggtgacccaggtcgacagcctgatcgcagatccctattccttc
tatgcgaaaaagatcatgggctttgccgccctcgacatgatcgacgccgacccgagcgcg
gcctggcggggcacgatcattcacgacattctcgaccagtgggcgagagaggatgattat
gccccggcggctttgcgccagcgggcgaaggctttcctggacgatcccggtctgcacccg
ctgatgcgcagcctctgggcgccgcgcctgctggaagggctggactggatcgctgctacg
ctggcggagggccgcaagactggccgcgaaccgctggcctcggaaatctatggcaaggcc
gagattgccggtgtcgagctgtcgggcatcgccgaccgtatcgacgggatgcccgatggc
ggtatcgccattgtcgattacaagaccggcggcgcgccgagcaacaaggcggtggccgaa
ggctataatctgcagcttggcctgctcgccgccatcgctgagctgggcggcttcaaggat
attgaaggcgaggcggttgctttcgaatattggtcgctggcgaaaaagggcggcaccgac
gaattcggttatatccgctcccccgcaaaagggcgcggcgagaatatcattccggccgac
gcgatggtagatcatgccgtcgcccggttcaacgaggccgccgatcactatctgaagggc
agcgagccgatgaccgccaagctgcatccggaatatgcccgctatgccgactatgaccag
ctgatgcggctcgaagaatggtacggccgcgcgccggcggaggctccggaccatgagtag
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