Sphingorhabdus sp. YGSMI21: CHN51_17565
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Entry
CHN51_17565 CDS
T05308
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
sphy
Sphingorhabdus sp. YGSMI21
Brite
KEGG Orthology (KO) [BR:
sphy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphy03400
]
CHN51_17565
Enzymes [BR:
sphy01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
CHN51_17565
DNA repair and recombination proteins [BR:
sphy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
CHN51_17565
Prokaryotic type
CHN51_17565
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GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
DUF5848
Usp
Motif
Other DBs
NCBI-ProteinID:
ATW05130
UniProt:
A0A2D3RHE1
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All DBs
Position
complement(3673318..3674709)
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AA seq
463 aa
AA seq
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MTKAKIIWFRRDLRLSDQAAVIAAAANGPVIPVYVLDDETPKHRIMGGASRWWLHRSLED
LEASLQDLGSRLILRHGRASEHLAEIVKAIGADEVHALRHYEPWWRNAERMLEKSLGDAA
QLILHDGNYLLPPGTVTTGSGTPYKIYTPFWKALRQHMPPGEPAAAPESLDTPDSWPDSD
ALDDWNLLPTKPDWAAAFGDPWQPGSAGAEDNLEEFADKAAEYDEGRNLPSEELVSRLSP
HLHFGEISPATVWNRLAGQGSKVETYLKELVWRDYAQNVIDQFPQYGGESYREKMRALPW
RDMDDDRVKADFDAWCHGKTGYPIVDAGMRELWATGWMHNRVRMIAASFLIKHLLIDWRE
GEQWFWDTLVDADYASNSVNWQWVSGTGVDSNMFVRIMAPLTQSEKFDAGDYIRQWVPEL
ADIDDPYIHDPEDHGCKPKDYPAKIIGHKEARERALDAYAKVK
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaagccaaaatcatctggttccgccgtgaccttcgcctttccgatcaggccgct
gtgatagctgccgctgcaaacggccccgtcattccggtctatgttctcgacgacgaaacg
ccgaaacaccgtatcatgggcggggcttcgcgctggtggttgcaccggtcactggaagac
ttggaagcatctttacaggatctgggctcgcggctgattctgcgccacgggcgagcttca
gagcatttggccgaaattgtcaaagcgatcggcgcggatgaagtgcatgcgctgcgtcat
tacgaaccctggtggcgcaatgccgagcgaatgttggaaaagtctctcggcgatgcggcg
cagttgatcctgcatgatggcaactatctgctgccgccagggacggtgaccacgggttcc
ggtacgccctataaaatctacacacccttctggaaggcgctgcgccagcatatgccgccg
ggggagcctgctgccgcgccagaaagcctcgataccccggacagttggccggatagcgat
gcgctggatgattggaacctgttgccgaccaagccggactgggccgcagcctttggcgac
ccctggcagccggggagcgctggcgcggaggacaatctcgaagaatttgctgacaaggcg
gcagaatatgacgagggtcggaacctgccttccgaggaattggtatcccgcctgtcgccg
catctgcatttcggcgagatcagcccggcgacggtctggaaccggctggcggggcagggg
agcaaggtcgagacctatctcaaggaactggtctggcgcgactatgcgcaaaatgtgatc
gaccagttcccgcaatatggtggagaaagctatcgcgagaaaatgcgcgccctgccgtgg
cgcgatatggatgacgatagggtgaaagccgacttcgacgcctggtgccacgggaagacc
ggctatccaatcgtcgatgccgggatgcgggaattatgggcgaccggctggatgcacaat
cgcgtccggatgatcgccgcgagctttctgatcaagcatctgctgatcgactggcgcgag
ggcgagcaatggttctgggacactctggtcgacgccgattacgcgtccaacagcgtcaac
tggcaatgggtgtcgggcaccggcgtcgacagcaatatgttcgtccggatcatggcgccg
ctgacccagtcggagaaattcgacgccggcgactatatccgccaatgggtcccggaactg
gcggatattgacgatccctatatccacgatccggaagaccacggctgcaagcccaaggat
tatccggccaagatcatcgggcacaaggaagcgcgcgaacgggcgctggacgcctatgcc
aaggtgaaatga
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