Sphingorhabdus sp. YGSMI21: CHN51_17715
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Entry
CHN51_17715 CDS
T05308
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
sphy
Sphingorhabdus sp. YGSMI21
Pathway
sphy00260
Glycine, serine and threonine metabolism
sphy00460
Cyanoamino acid metabolism
sphy00630
Glyoxylate and dicarboxylate metabolism
sphy00670
One carbon pool by folate
sphy00680
Methane metabolism
sphy01100
Metabolic pathways
sphy01110
Biosynthesis of secondary metabolites
sphy01120
Microbial metabolism in diverse environments
sphy01200
Carbon metabolism
sphy01230
Biosynthesis of amino acids
sphy01240
Biosynthesis of cofactors
sphy04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
sphy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
CHN51_17715 (glyA)
09102 Energy metabolism
00680 Methane metabolism
CHN51_17715 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CHN51_17715 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
CHN51_17715 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
CHN51_17715 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
CHN51_17715 (glyA)
Enzymes [BR:
sphy01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
CHN51_17715 (glyA)
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Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
ATW05158
UniProt:
A0A2D3RHF5
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Position
complement(3700779..3702086)
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AA seq
435 aa
AA seq
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MSNVADIQDIRQTGFFDFSVDESDPAVAGAINSELARQQNQIELIASENIVSKAVLQAQG
SVFTNKYAEGYPGRRYYQGCAPSDDVETLAIERAKQLFDCGFANVQPHSGAQANGAVMLA
LVKPGDTILGMSLDAGGHLTHGAKPAQSGKWFNAIQYGVNDDDHLINYEEVEALAKEHQP
KLIIAGGSAYPREIDFAKFRAIADAVGAMFMVDMAHFAGLVAAGLHPSPLDHAHVVTTTT
HKTLRGPRGGMILTNDEAIAKKINSAVFPGLQGGPLMHVIAAKAVAFGEALRPEFKSYSA
AVIENAKVLAATLKERGANVVAGGTDTHLALIDLSPLGITGRDADEALERAGITCNKNSI
PNDPQPPMKTSGIRVGSPAGTTRGFGPAEFRMIGDMVADVLDGLREKGEGGDPAVEADVR
ERVQELCDRFPIYQD
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacgtcgccgatattcaggatatccgccagaccggtttcttcgacttttcggtg
gacgagagcgatccggcggttgccggagcaatcaactcggaactggcccggcagcagaac
cagatcgagctgatcgcttctgaaaatatcgtctccaaggcggttttgcaggcacagggg
tctgtcttcaccaacaaatatgccgagggctatcccggacgtcgttattatcagggctgt
gcgccatcggatgatgtcgagacgctggcgatcgaacgcgcgaagcaattgttcgattgc
ggcttcgccaatgtgcagccgcattcgggcgcgcaggccaatggcgcggtgatgctggcg
ctggtcaagccgggcgatacgatccttggcatgtcgctcgacgcgggcggtcatctgacc
catggcgcgaaaccggcgcaatcgggcaaatggttcaacgccatccaatatggcgtcaat
gatgacgaccatctgatcaattacgaggaagtcgaggctctggccaaagagcatcagccg
aaactgatcatcgctggtggctccgcctatccgcgtgaaatcgattttgccaagttccgg
gcgatcgccgatgctgtcggagccatgttcatggtcgacatggcccatttcgccggactg
gttgccgccggtctgcaccccagtccgctggatcacgcccatgtcgttacgaccaccacc
cacaagaccctgcgcgggccacgtggtggcatgatcctgaccaacgacgaagcgattgcc
aagaagatcaactctgcggttttccccggcctgcagggcggtccactgatgcacgtcatt
gcggccaaggcggttgcctttggcgaagcgctgcgtccggagttcaaaagctattcggca
gcggttatcgaaaatgccaaggtcttggcggccacactcaaggaacgcggcgccaatgtc
gtcgctggtggcaccgacacccatctggctttgattgatctgtcgcctctcggaatcacc
ggacgcgatgccgatgaagcgctcgaacgggcagggatcacctgcaacaagaacagcatc
cccaacgatccgcagccgccgatgaagaccagcggtatccgcgtcggttctcctgccggt
accacgcgtggtttcggtccggcggaattccggatgatcggcgacatggttgccgacgtg
ctcgacggactgcgcgaaaagggcgagggcggcgaccctgccgtcgaagccgacgtgcgc
gaacgggtgcaggagctttgcgaccgtttcccgatctaccaggattga
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