KEGG   Sphingorhabdus sp. YGSMI21: CHN51_18080
Entry
CHN51_18080       CDS       T05308                                 
Name
(GenBank) DNA-binding protein HU
  KO
K03530  DNA-binding protein HU-beta
Organism
sphy  Sphingorhabdus sp. YGSMI21
Brite
KEGG Orthology (KO) [BR:sphy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sphy03032]
    CHN51_18080
   03036 Chromosome and associated proteins [BR:sphy03036]
    CHN51_18080
   03400 DNA repair and recombination proteins [BR:sphy03400]
    CHN51_18080
DNA replication proteins [BR:sphy03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    CHN51_18080
Chromosome and associated proteins [BR:sphy03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    CHN51_18080
DNA repair and recombination proteins [BR:sphy03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      CHN51_18080
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_2 HU-CCDC81_euk_1 DUF2267 Nup214_FG Rpf1_C
Other DBs
NCBI-ProteinID: ATW05224
UniProt: A0A2D3RHM2
LinkDB
Position
3785133..3785450
AA seq 105 aa
MNRQDLISAVAEASGLSKTDAAKAVDAIFDAIAGTLSRGGDVRLAGFGTFSTSRRKASTG
RNPRTGEPMQLAPSTSAKFKAGKGLKEAINNRRGGDDGWIGPKFR
NT seq 318 nt   +upstreamnt  +downstreamnt
atgaaccgacaggacctcatcagcgccgttgccgaagcaagcggcctgagcaagacagac
gcagccaaagcggtcgacgcgattttcgatgcgattgcgggtacattgagccggggcgga
gatgtccgtctcgccggatttggcacattctccacatccagacgcaaggcatcgaccggc
agaaacccccgcaccggggaaccgatgcaattagcaccctcgaccagtgcaaaattcaag
gccgggaagggtctgaaagaagccatcaacaaccgccgcggcggcgatgatggctggatt
ggccccaaattcagataa

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