Sphingorhabdus sp. YGSMI21: CHN51_18570
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Entry
CHN51_18570 CDS
T05308
Name
(GenBank) methylase
KO
K26273
protein strawberry notch
Organism
sphy
Sphingorhabdus sp. YGSMI21
Brite
KEGG Orthology (KO) [BR:
sphy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sphy03036
]
CHN51_18570
Chromosome and associated proteins [BR:
sphy03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
CHN51_18570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
MTS
Motif
Other DBs
NCBI-ProteinID:
ATW05693
UniProt:
A0A2D3RIY4
LinkDB
All DBs
Position
unnamed:complement(11706..15917)
Genome browser
AA seq
1403 aa
AA seq
DB search
MPIDPYSISHPKASILLSAGVNLSSKLDKPLTRDMLIKHLAAATGTSMVQFTIRDAFEML
ECAIVAHIQRDEKAASQQLPSLIATYPDLPTHTVRSELQVRRQQFSTPAPLALFAQVRAA
LTPDDFVLEPSAGTGLLATEALRLGATLRLNELDTCRRALLTGLYPGAAITNCDGAEIAA
RWQGRAPTIVLMNPPFSSNADGYEDHFTALRHLHSALKVLSTGGRLVAILPSWIDRPGRN
AASLAKMITGASIVERFTLGEGCFAKHGTNIATTLLVLDKLPDLPMAHNIHIAALAELTA
QPKPLPRREITPPNKTRSPTKSLFGGFVRPAEPVQPIPAHRPVEDAITPVVYTALAEPAA
LGEQVGDYLPYRPARMIFEQAGEHPTALVESLAMGSVAPPKPHYRPMLPTRIVKDRLLSV
AQLETVAYAGQAHADWLTGNIDDENKGEVIEQRIRKGYFLGDGTGAGKGRQIAATILDNW
LKGYRRHIWVSKNATLLEDARRDWTAVGGIAADIQPLKNWPLGTNVAMSEGVLFVPYATL
QSQREDSSRLTQILDWAGPDFEGVIAFDEAHAMGGVAGGETARGKTKGSEQGIAGVTLQD
KLPAARVLYASATGASNVNNLAYAVRLGLWGPNTAFPTRDLFIEEIAAGGIAAMEVVARD
LKSMGLYAARALSFAGVEYEMLEHILSAEQIETYDRYAEAWSIIHQNMEAALEESGVIDA
VSGDTLNAGAKGAARSRFESVKQRFFQQLLMSLKLPSLFPAIETHIADEMAIIIQLVSTG
EAMLDRRLADHDENGTDELDIDLSPREYLFDYLTRAFPTRQMQTYIDLEGEMRSQPMQDE
HGNPVHCADAIARRDACLEQLGAMPPISSALDAIITRFGEDKVAEITGRSRRLSTASDGR
QLVQRRSARSNAAETDAFMEDRKQILIFSDAGGTGRSYHASLDVPNQRRRVHFLLEPGWR
ADAAIQGLGRTHRTHQASSPLFRPVTTDCRGERRFISTIARRLDSLGALTRGQRQTGGQN
LFDPADNLESDYAVSALNAWFRLLHSGKLKSASFQDFQKRTGLELEGEGGELRMDLPPIQ
RWLNRILALPIAMQNGVFDEFLGLVEQRVAKAREAGTLDLGVETIAVQTLEIVSERLLRT
DRCGATTNLAELAITRKRFVRSNDDIDFRRSWDQSAEPMKNDKSGKVALMVSQRDSLLDD
GTTVRRFKLIRPSRIDHIDDQALAESNWRKIHDTEFAKLWTVEADEARDTLENDTLFIAT
GLLLPVWRKIPSKMLSVVRIAAADGRSILGRVVDAGDLGALCQGLGLEAPKLTPNAMIES
ARSGARVPVNGLDELTLKTSRVAGAQRLEIIGAHAARLGWYKSRGCFTEIIAYKTRLFMP
DTQAVTILEAICAESQTERTKVA
NT seq
4212 nt
NT seq
+upstream
nt +downstream
nt
atgccgattgacccatatagtatttcccaccctaaagcgtccatcctgctctctgccgga
gtgaacctgtcctccaagcttgacaagccgcttacgcgagacatgctgatcaagcatctt
gccgcagcaactggcaccagcatggtgcaattcaccatccgcgacgccttcgaaatgctc
gaatgcgccatcgttgcccatattcaacgggacgagaaggccgcaagccagcagcttcct
agtctgatagcgacctaccctgatctcccaacgcacaccgttcgcagcgagttgcaagtg
agacggcagcaattttcgacccctgcaccgctcgccctgtttgcacaggtgcgcgccgca
ttaacccccgatgattttgttctagaacctagcgcgggcactggtttgcttgccaccgaa
gcattgcggctcggtgctacactcaggctcaatgaactggatacctgccggcgcgcgctg
ctcaccggcctttatcctggcgccgccataaccaattgcgatggagccgaaatcgccgca
cgctggcagggaagggcgcccaccatcgtcctcatgaatccgcccttctcgagcaacgcc
gatggttatgaagatcatttcactgcgctcagacaccttcattcggccctaaaagtgctg
tctaccgggggaagacttgtcgccattctgccgagctggatcgaccgtccaggccgcaac
gccgctagtctcgccaaaatgatcacgggtgcctcgattgtagaacgctttacgttgggc
gaagggtgctttgccaagcacgggacgaatatagcgacgaccttgcttgtgctggataag
ctaccggatctgccaatggctcataatattcacattgcggccttggctgagctaactgcc
cagccaaagccgctgccgcgccgcgagatcacgccaccaaacaaaacccgatcgccaacc
aaatcattgttcggcggcttcgtccgccctgcagagccggtgcaacccattccggctcac
aggccagttgaagacgccatcacacctgttgtttataccgcactcgcggaacctgctgcg
ctaggcgaacaagttggtgactatcttccataccgtccggcacggatgatcttcgagcag
gccggcgaacatcctacagccctggtcgaaagtcttgccatgggctcggtggcgccgcca
aaaccccattaccggcctatgcttcccacccgcatcgtcaaagaccggcttttatcggtc
gcacagctcgaaacggtcgcttatgcaggtcaggcccacgccgactggctgaccggcaat
attgacgacgagaacaagggagaggtgatcgaacagcgtatccgcaagggatattttctt
ggtgacggcacgggggcagggaaggggcgacagatcgctgccactattctcgataattgg
ctcaagggctaccgccgccatatatgggtttcgaagaacgcgaccctgcttgaagatgcg
cgccgcgactggacggccgttggcgggatcgccgccgatatccagcccctcaaaaattgg
ccactgggtacaaatgttgcaatgagcgagggcgtgctgttcgtcccctatgccacgttg
caatctcagcgcgaagatagcagccgcctgacacagatactcgattgggccggccccgat
tttgaaggggtcatcgctttcgacgaggcgcacgccatgggcggcgttgcaggcggggag
acggctcgcggcaagaccaagggttctgaacagggcattgccggtgtgaccctgcaggac
aaattgcctgctgcacgcgttctttacgcttcggccaccggcgcgtcgaacgtcaacaat
ctcgcctatgccgtgcgccttggcctatggggaccaaatacagcctttcccactcgcgat
ctgtttatcgaggaaattgccgcaggcggaatagctgcaatggaagtggtcgcgcgcgat
ctcaaatcaatgggcctctatgccgcccgcgcgctaagcttcgccggtgttgaatatgaa
atgcttgaacatattctttccgccgagcagatcgaaacctacgaccgctatgccgaagcc
tggtctatcatccaccagaatatggaagctgcgcttgaggaaagcggagtaatagatgcg
gtctcgggcgacacactcaacgcaggagccaagggcgcagcccggtcccgttttgaaagc
gttaaacagcggtttttccagcagctccttatgagtttgaaactaccgagcctgtttcct
gctattgagacccatatcgccgacgaaatggccatcattatccagcttgtctccactggc
gaggcaatgctggaccgacgactggcagaccatgacgaaaacggcacagacgagcttgat
attgatctcagcccgagggagtatctcttcgactatctcacccgcgcattcccgacccgc
caaatgcagacctatatcgatctggaaggcgaaatgcgttcgcaaccgatgcaggacgag
catggcaatccggtccactgtgccgatgcaatcgccaggcgtgatgcatgccttgaacag
cttggagccatgccgccaatctcttccgcgcttgacgccatcatcacccgctttggcgag
gacaaggtggccgaaatcacagggagaagccgcaggctttccactgcaagtgatggacgc
caactcgttcagcgccgttcggcgcgcagtaatgcggcggaaaccgatgctttcatggaa
gaccgcaagcagatattgatcttctccgatgccggcggcacggggcgcagctatcatgcc
agtcttgatgtgcctaaccagcgccgccgcgtccacttccttcttgaaccgggttggcgc
gccgatgcggctatccaggggcttggacgcacccaccgcacccatcaggccagctccccg
cttttccggcccgtcaccaccgattgccgtggcgagcggcgctttatctcaaccattgct
cggcggctcgatagcctcggcgctctcacccgggggcagcgtcagactggcggccaaaat
ctgtttgacccggctgacaatctggaaagcgactacgccgtgtccgccctcaatgcctgg
ttccgactgctgcattccggcaaactcaaaagcgcatcattccaggatttccagaagcga
accggccttgagctcgaaggcgagggcggtgaactgcgtatggacttgccgcctatccag
cgctggctcaaccgcatcctcgcgctgccgatcgccatgcaaaacggcgtcttcgatgaa
tttctcgggctggtcgaacagcgtgtagcaaaggcgcgcgaagcgggaacgctcgatctc
ggggttgaaaccatcgctgtccaaaccctcgaaattgtttccgagcgtctgctacggact
gaccgctgcggagcgacaacaaaccttgccgagcttgcgatcacccgcaaacgatttgtt
cgcagcaacgatgatatagattttcggcgcagctgggatcaaagcgccgagccgatgaag
aacgataaatcgggcaaggttgcgctgatggtcagccagcgcgattcgctgctcgacgat
ggaaccaccgtccggcgtttcaagctcatccgtccttcacgtatcgatcatatagacgac
caggccctggccgaaagcaactggcgcaaaattcacgataccgaatttgcaaagctctgg
acggttgaagccgatgaagcgcgtgatacactcgaaaatgacactttgttcatcgccact
ggattgttgctgcccgtctggcgcaagattccctcaaagatgctttcagttgtgcggata
gccgctgccgacggacgttcaattctcggccgcgtggttgatgcaggtgatttgggcgcg
ttatgccagggtctcggcctggaagcacccaaacttactcccaatgcaatgattgaaagc
gcccgcagcggtgcccgtgttccggtcaatggtctcgacgagttaacgctcaaaacctcc
cgggtagcaggagcgcagcgcctcgaaattatcggcgctcatgccgcgcgtcttggctgg
tacaagtcgaggggctgcttcaccgagattatcgcctataaaacacggcttttcatgccg
gatacccaagccgtaaccatcctcgaggcgatttgcgcggaaagtcagacagaacgaacc
aaggtcgcctga
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