Sphingorhabdus sp. YGSMI21: CHN51_18955
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Entry
CHN51_18955 CDS
T05308
Name
(GenBank) IS3 family transposase
KO
K07497
putative transposase
Organism
sphy
Sphingorhabdus sp. YGSMI21
Brite
KEGG Orthology (KO) [BR:
sphy00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
CHN51_18955
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Gene cluster
GFIT
Motif
Pfam:
rve
HTH_21
rve_3
HTH_Tnp_1
rve_2
HTH_23
rva_4
Terminase_5
DUF6280
Motif
Other DBs
NCBI-ProteinID:
ATW05754
UniProt:
A0A2D3RJ55
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Position
unnamed:complement(join(94732..95672,95672..95960))
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AA seq
409 aa
AA seq
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MSKTTNKFSPKVRERATRMVLDHRQDYPSRWAAVVSISQKIGCSPPTLHEWVKRAEVDSG
TRAGVPSDVADKLKALERENRELRQANEILRKASAYFCSGGARPPVQAMITFIDDNRGSY
GVEPICKLLPIAPSTYYSHVVKRQDPSRMSARAQRDILLKPEVARVFDENFGVYGVRKVW
RQMKREGYDIARCKVEPLMHDMGLAGVIRGKPVRTTVSDKAAPCPLDHVNRQFHSPAPNM
LWVSDFTYVATWAGFVYVAFVIDVYTRYIVGWRVSRTAHASFVLDALEQALHDRRPTHRG
GLIHHSDRGSQYVSIKYTERLAEAGIEPSVGSVGDSYDNALAETINGLYKAEVIHRRGPW
RSLEAVEYATLEWVDWFNNKRLLEPIGNIPPVEAEKNYYAMLDETDMAA
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagaccacaaacaagttttcaccgaaggttcgcgaacgggcgacccgcatggtg
ctggatcatagacaggattatccctcgcgctgggctgcggtggtgtccatttcgcagaag
atcggctgctcaccgccgacactgcatgaatgggtcaagcgagcggaagtggatagcggc
acgcgcgccggtgttcccagcgatgttgctgacaagctcaaagcactggaacgcgagaac
cgcgaactgcgccaagccaacgagattttacgtaaggcatcggcatatttttgctcaggc
ggagctcgaccgcccgttcaagcgatgatcacgtttatcgacgataaccgtggatcttat
ggggtcgagccgatctgcaagttgctgccgatcgccccgtcaacctattatagtcatgtg
gtcaagcggcaggatccgtcgcgcatgtcagcccgcgcgcagcgcgatatactgctgaag
ccggaggtggcccgagtgtttgacgagaacttcggggtatatggcgtgcgcaaggtctgg
cggcagatgaagcgtgaaggctatgatattgcacgttgcaaggttgaaccgctgatgcac
gacatgggcttggccggcgtgatacgaggcaagccagtgcgcaccacggtcagcgataaa
gcagcgccttgtccgcttgaccatgtgaaccggcagttccactcgccagcgcccaatatg
ctgtgggtgtcagattttacttatgtcgcaacctgggcaggctttgtctatgtcgccttc
gtgatcgatgtttacacccgctacattgttggctggcgggtgagccgaaccgctcatgcc
agctttgttctcgatgctttggagcaggctttacatgatcgcaggcccacgcatcgcggc
ggtctgatccatcacagtgaccgtggcagccaatatgtatcgatcaaatatactgaacgc
ttggccgaggcaggcatcgaaccatcggtcggcagcgtcggcgacagctatgacaacgct
ttggcggaaacaatcaatggcctttacaaggcagaggtaatccaccggcgcggaccatgg
cggtcgttagaggccgtcgaatatgccacactggaatgggtagactggttcaacaataaa
aggctgctggaacccatcggcaatatcccgcccgtggaagctgagaaaaactactacgcc
atgctggacgaaaccgacatggccgcttaa
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