Sphingobacterium sp. CZ-2: E3D81_00385
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Entry
E3D81_00385 CDS
T06166
Name
(GenBank) PDZ domain-containing protein
Organism
sphz
Sphingobacterium sp. CZ-2
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PD40
Peptidase_S41
Tricorn_C1
DPPIV_N
PDZ_2
PDZ_6
PDZ
PDZ_Tricorn
Cytochrom_D1
Motif
Other DBs
NCBI-ProteinID:
QBR10716
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All DBs
Position
92175..95357
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AA seq
1060 aa
AA seq
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MNKSILTLALLLAGGSACMAQVQPTFLSNPTLSPDAKTIVFSYEGDLWKVPSTGGNALRL
TAMSGNEVSPRISPDGKWLAFSANQNGNMDVYVMPLEGGDIQQLTYHESSDEVDSWSWDS
QNVYFTSGRENRMSSYKVNSKGGTAQRIIPHFFNYIHGMVETPSGELLFTDTWESYTAAN
RKRYKGAFNPDIKGYNPKDKSFKEYTNYIGKDLWPTVDKSGKIFFASDEGNDEYNLYTFE
NGRKTELTNFKESIRSPQVAANGSSVIFEKGYQLYIYDVASKKTTQPSILLGRNQVLGKS
KEFDVKGQISNYDVSPDGKKLAFVSRGELFVSDIDGKFVRQMPSSGERVMEVIWLKDNKT
LVFSQTFAGYQNWFSRSADGKGETKQLTSDKRNNRDINFNKERTKAVYLSGRDEVRILDL
NSLKSNTIVKDELWAFQNSSPSFSPDGQYVLFTAMRNFEQDIFVHYLANNKTHNLTNTGV
SETSPVFSADGKYIYFAGNRTKPSYPMGMGNASIFRMALENFDEPYRLSKFDELFAEPKK
EQKDTSNNMKTPEKDKTVKTAAAKPEPKTETKKNVVSIDFNGLLDRIQQVSPFAGSQSGP
QAFAKGEKQFLFFQSNHEGNFGLYRITYEPFTAAKTEKVMDGGFGHIIEVDGKYFVLAQG
TLQKYNIDQNRLERVEISSKFNRDLDKEFQQMFYETWANVEENFYDPSFHGVDWEGIKQK
YAFYLPGINNRQDLRIMLNDMLGELNSSHMGFSTMGSDERKDFNFVSNELGVTYDPSNPY
KISRIVRNSPASRIGVDLQVGDVLVAVNGTKIDRSLDRDYYLTMPSLASELQLTVNRNGK
DVDVNIRPQSGAAFKELLYDEWIKGNRSKVDQMSGNRIAYSHMKNMGAGELNTFLLDMAE
QENNKDAIILDLRYNTGGNVHDEVLRFLSQKPYLQWQYRGGKKSPQSNFAPAAKPIVLLI
NEQSLSDAEMTAAGFKELKLGKIIGTETYRWIIFTSGKGLVDGSFYRLPSWGCYTLDGKD
LELTGVAPDIAVKNTTADRMADRDPQLERAVQEILKDLKK
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaatcaatattaacccttgccttgctcctggctggaggaagtgcatgcatggcg
caagttcaacccacttttctttcgaacccaacattgagtcctgatgcgaaaaccatcgtt
ttcagttatgaaggtgatctatggaaagtgcccagtacaggaggaaatgctttacgctta
acggccatgtctggaaatgaagtttccccaagaatatctcccgatgggaaatggttggca
ttttcagctaatcagaatggaaatatggatgtgtatgtgatgcccttggaaggcggtgac
atccaacagctgacctaccacgaatcttccgatgaggtggatagttggagctgggatagc
cagaatgtctacttcacatccggaagggaaaaccgaatgagcagttataaggtcaacagc
aagggcgggacagcccaacgtatcattccccattttttcaactatatccatgggatggta
gagaccccaagtggagaactcttgtttactgatacttgggagagttatacagctgccaat
agaaagcgctataaaggagctttcaacccggatattaaagggtataatccgaaggataaa
tccttcaaggaatacacgaattacatcggtaaggatctatggccaacggtggataagtcc
ggcaagatcttttttgcttcggatgaaggaaacgatgaatacaacctttacacctttgag
aatggcaggaaaacggaactgaccaattttaaggaatccatccgttcgccacaagtggcg
gccaatggctcttcggtaattttcgaaaaaggctatcaattgtacatctatgatgtagcc
agtaaaaaaacaactcaaccttctattcttcttggtagaaaccaagtgcttggaaaatcg
aaggaatttgatgttaagggccaaatctctaattatgatgtatctccggatggtaaaaaa
ctggcctttgtttcacgtggagagttgttcgtttcggatatcgatggaaaatttgttcgg
caaatgccatcttcgggcgagcgggtaatggaagtgatctggttaaaggacaacaagacc
ttggttttcagccagacttttgctggataccagaactggttcagccgttcagcagatgga
aaaggggagaccaaacagttgacctccgacaagaggaacaatagggatatcaatttcaat
aaggaaagaacaaaggcggtttacctatcaggccgggatgaggtaaggatcttggatctg
aattccctgaagagcaataccattgtgaaggatgaattatgggcattccaaaattcatcc
ccttcattttcaccggatggtcagtatgtgctgttcacagccatgcgtaattttgaacag
gatatttttgttcactacctagccaataacaaaacccataacctgacaaatacaggcgta
tcggaaacctctccggtattctctgctgatggaaagtatatctattttgctggaaatcgc
accaagccatcttacccaatgggaatggggaatgccagcatcttccggatggccttggag
aatttcgatgaaccttatcgcttgagcaaatttgatgagctttttgcagaacctaaaaag
gaacagaaagataccagcaacaatatgaaaacgcctgaaaaagataaaacggtaaaaacc
gctgcagcaaagccagagccgaaaacagaaaccaagaaaaatgtggtcagcatcgatttc
aatggtctgttggaccggatccaacaggtgagcccatttgcgggttcacaaagtggtcca
caggcatttgccaaaggcgagaaacagtttctgttcttccaatccaatcatgaaggaaat
tttgggctatacaggataacgtatgaaccatttacagcagcaaaaaccgagaaagtgatg
gatggaggtttcggccacatcatcgaagtggatggaaagtattttgtactggcacagggc
actttacaaaagtacaacatcgatcagaaccggttagagcgggtagagatcagctccaaa
ttcaacagggatctggataaggaattccaacagatgttctatgagacctgggcaaatgtg
gaggagaacttttacgatccttccttccatggggtggattgggaaggcatcaagcaaaaa
tatgctttctacctgcctggaataaacaatagacaagacctccggatcatgttgaacgat
atgttgggcgagctgaactcctctcacatgggattcagtacgatgggatctgatgaaaga
aaagacttcaattttgtgagcaatgaattgggggttacctatgatccatcgaacccctac
aagatttcgcggatcgtaagaaacagtccggcatcccgtataggggttgatctgcaggta
ggggatgtgctggtggcagtcaatggtaccaagattgatagatccttggatcgggattat
tacctgacgatgccttccttagcgagcgaactgcaattgacggtgaatagaaatggaaaa
gatgtggatgtgaatatccgtccgcaaagtggggcagcctttaaggaattactgtatgat
gaatggatcaaaggaaaccgttcgaaggtagatcaaatgagtggcaaccgtattgcctat
tcgcacatgaagaacatgggggcaggcgaactgaacacctttttgttggatatggccgag
caggaaaacaataaagatgccatcattttggacctgaggtataatacaggaggaaatgtt
catgatgaggtattacgctttttgtcgcagaaaccttatttgcaatggcagtaccgtggc
ggtaagaaatcgcctcagagtaattttgctcccgctgccaaacctatagtgctattgatc
aatgagcaatccttaagtgatgcagagatgacggctgcaggattcaaggagctaaaactt
ggcaagatcatcggaacagagacttaccgctggattatctttacctctggtaaaggattg
gtggatggttctttctaccgattgccatcttggggatgttataccctggacggaaaagat
ctggagttaacgggtgttgcgccagatatcgctgtaaagaatacgacagcagaccgcatg
gcggatagagatccgcaattggaacgcgctgtgcaggaaatcttaaaggacctgaagaaa
tag
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