Sphingobacterium sp. CZ-2: E3D81_00685
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Entry
E3D81_00685 CDS
T06166
Name
(GenBank) integration host factor subunit beta
KO
K03530
DNA-binding protein HU-beta
Organism
sphz
Sphingobacterium sp. CZ-2
Brite
KEGG Orthology (KO) [BR:
sphz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sphz03032
]
E3D81_00685
03036 Chromosome and associated proteins [BR:
sphz03036
]
E3D81_00685
03400 DNA repair and recombination proteins [BR:
sphz03400
]
E3D81_00685
DNA replication proteins [BR:
sphz03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
E3D81_00685
Chromosome and associated proteins [BR:
sphz03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
E3D81_00685
DNA repair and recombination proteins [BR:
sphz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
E3D81_00685
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_euk_1
DUF4777
Hs1pro-1_C
Motif
Other DBs
NCBI-ProteinID:
QBR10767
UniProt:
A0A4P7DRH6
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All DBs
Position
153297..153584
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AA seq
95 aa
AA seq
DB search
MTKAEIIAEISNKTGLEKVDVQETVEAFFKVVKSAMVGGENVYVRGFGSFVVKKRAEKTA
RNISKNTAIIIPEHYVPSFKPAKVFVEKVKNGNKK
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgactaaagcagaaattattgcagagatctctaacaagactgggttagagaaggttgat
gtacaagagaccgttgaagcattcttcaaagtagttaaaagcgccatggttggtggtgaa
aatgtttacgtaagaggcttcggtagctttgtggtaaaaaagagagcagaaaaaacagct
cgtaacatctcaaaaaatacagctatcattattcctgagcactacgtgcctagctttaaa
ccagcaaaagtttttgtagaaaaagtgaaaaacggaaataaaaaataa
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