Sphingobacterium sp. CZ-2: E3D81_01000
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Entry
E3D81_01000 CDS
T06166
Symbol
xseB
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
sphz
Sphingobacterium sp. CZ-2
Pathway
sphz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sphz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
E3D81_01000 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphz03400
]
E3D81_01000 (xseB)
Enzymes [BR:
sphz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
E3D81_01000 (xseB)
DNA repair and recombination proteins [BR:
sphz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
E3D81_01000 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
DUF7077
VAPB_antitox
DIP0205-like_N
KIF9
Bac_small_YrzI
Motif
Other DBs
NCBI-ProteinID:
QBR10821
UniProt:
A0A4P7DN85
LinkDB
All DBs
Position
223279..223485
Genome browser
AA seq
68 aa
AA seq
DB search
MENKYTYQEAYEELQQIVSEIESGDVAVDELTVKINRATALLTICKAKLTASEEEVEKLL
KKLEEEKN
NT seq
207 nt
NT seq
+upstream
nt +downstream
nt
atggaaaataaatacacttaccaagaggcttatgaagagcttcaacagatcgtgtcggag
attgagtcgggcgatgttgccgtcgatgaattgacggtaaagattaaccgtgcaacagcc
ttgttgaccatctgtaaagccaaattgacagcctcggaagaagaggtcgagaaactcctc
aaaaaattagaagaagagaaaaattag
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